RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 PTGISQ16647 500 aa12.27□□□□□ -0.44
COL9A1-202ENST00000357250 ANGEL2Q5VTE6 544 aaKnown RBP12.27□□□□□ -0.44
COL9A1-202ENST00000357250 TBC1D19Q8N5T2 526 aa12.27□□□□□ -0.44
COL9A1-202ENST00000357250 NOA1Q8NC60 698 aaKnown RBP12.27□□□□□ -0.44
COL9A1-202ENST00000357250 DCUN1D1Q96GG9 259 aa12.27□□□□□ -0.44
COL9A1-202ENST00000357250 FOPNLQ96NB1 174 aa12.27□□□□□ -0.44
COL9A1-202ENST00000357250 TRIM10Q9UDY6 481 aa12.27□□□□□ -0.44
COL9A1-202ENST00000357250 SUPT3HO75486 399 aa12.27□□□□□ -0.45
COL9A1-202ENST00000357250 PDAP1Q13442 181 aaKnown RBP12.27□□□□□ -0.45
COL9A1-202ENST00000357250 CUL2Q13617 745 aa12.27□□□□□ -0.45
COL9A1-202ENST00000357250 DAB2IPQ5VWQ8 1189 aa12.27□□□□□ -0.45
COL9A1-202ENST00000357250 CEP70Q8NHQ1 597 aa12.27□□□□□ -0.45
COL9A1-202ENST00000357250 CLMNQ96JQ2 1002 aa12.27□□□□□ -0.45
COL9A1-202ENST00000357250 OGTO15294 1046 aa12.27□□□□□ -0.45
COL9A1-202ENST00000357250 HSPA1AP0DMV8 641 aaKnown RBP12.27□□□□□ -0.45
COL9A1-202ENST00000357250 HSPA1BP0DMV9 641 aaKnown RBP12.27□□□□□ -0.45
COL9A1-202ENST00000357250 KLC1Q07866 573 aa12.27□□□□□ -0.45
COL9A1-202ENST00000357250 KYNUQ16719 465 aa12.27□□□□□ -0.45
COL9A1-202ENST00000357250 ZBTB41Q5SVQ8 909 aa12.27□□□□□ -0.45
COL9A1-202ENST00000357250 SLC16A10Q8TF71 515 aa12.27□□□□□ -0.45
COL9A1-202ENST00000357250 UBQLN1Q9UMX0 589 aaKnown RBP12.27□□□□□ -0.45
COL9A1-202ENST00000357250 KCNH4Q9UQ05 1017 aa12.27□□□□□ -0.45
COL9A1-202ENST00000357250 H2AFYO75367 372 aaKnown RBP12.26□□□□□ -0.45
COL9A1-202ENST00000357250 SLC2A3P11169 496 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 GRIK1P39086 918 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 RGS4P49798 205 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 PDK2Q15119 407 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 Q4G0T1 1027 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 NOTUMQ6P988 496 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 PATL1Q86TB9 770 aaKnown RBP12.26□□□□□ -0.45
COL9A1-202ENST00000357250 AGBL1Q96MI9 1066 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 FAM205AQ6ZU69 1335 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 TLR2O60603 784 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 ANXA9O76027 345 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 PDHA1P08559 390 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 RARGP13631 454 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 NAMPTP43490 491 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 CNGA3Q16281 694 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 RBBP7Q16576 425 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 C16orf87Q6PH81 154 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 GID8Q9NWU2 228 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 SLC30A1Q9Y6M5 507 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 HNRNPCL2B2RXH8 293 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 SLC37A4O43826 429 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 NDUFS3O75489 264 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 LSM8O95777 96 aaKnown RBP12.26□□□□□ -0.45
COL9A1-202ENST00000357250 PON1P27169 355 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 KBTBD12Q3ZCT8 623 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 E2F7Q96AV8 911 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 ERP27Q96DN0 273 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 DTNBP1Q96EV8 351 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 OLFML3Q9NRN5 406 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 POLRMTO00411 1230 aaKnown RBP12.26□□□□□ -0.45
COL9A1-202ENST00000357250 SLC26A2P50443 739 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 ITIH4Q14624 930 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 TMEM259Q4ZIN3 620 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 NOP9Q86U38 636 aaKnown RBP12.26□□□□□ -0.45
COL9A1-202ENST00000357250 GMCL1P1Q8NEA9 526 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 ARMC2Q8NEN0 867 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 RNF217Q8TC41 542 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 FAR2Q96K12 515 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 FUCA2Q9BTY2 467 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 RUBCNLQ9H714 662 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 NPHS2Q9NP85 383 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 ABCF3Q9NUQ8 709 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 RIC8BQ9NVN3 520 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 IRAK4Q9NWZ3 460 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 POLIQ9UNA4 740 aa12.26□□□□□ -0.45
COL9A1-202ENST00000357250 C3P01024 1663 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 DNAJC6O75061 913 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 ENO1P06733 434 aaKnown RBP12.25□□□□□ -0.45
COL9A1-202ENST00000357250 ITGA4P13612 1032 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 H2AFXP16104 143 aaPredicted RBP12.25□□□□□ -0.45
COL9A1-202ENST00000357250 HSD17B3P37058 310 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 GMPSP49915 693 aaPredicted RBP12.25□□□□□ -0.45
COL9A1-202ENST00000357250 ALDH18A1P54886 795 aaKnown RBP12.25□□□□□ -0.45
COL9A1-202ENST00000357250 KDSRQ06136 332 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 SLC29A2Q14542 456 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 LRP10Q7Z4F1 713 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 RNF135Q8IUD6 432 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 KCNV2Q8TDN2 545 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 IL17RBQ9NRM6 502 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 CHMP2BQ9UQN3 213 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 CDYLQ9Y232 598 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 PCDHAC2Q9Y5I4 1007 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 TRPC5OSA6NMA1 111 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 PHF20L1A8MW92 1017 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 CES2O00748 559 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 HSPA13P48723 471 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 TAF6P49848 677 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 ZNF484Q5JVG2 852 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 LONP2Q86WA8 852 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 MFN1Q8IWA4 741 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 C4orf33Q8N1A6 199 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 HPDLQ96IR7 371 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 ZDHHC15Q96MV8 337 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 MANSC1Q9H8J5 431 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 DYRK4Q9NR20 520 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 DBR1Q9UK59 544 aaKnown RBP12.25□□□□□ -0.45
COL9A1-202ENST00000357250 SALL1Q9NSC2 1324 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms