RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 KIF12Q96FN5 646 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 PAIP1Q9H074 479 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 PRKAG2Q9UGJ0 569 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 ADAM30Q9UKF2 790 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 EVPLLA8MZ36 301 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 CDH16O75309 829 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 NUP107P57740 925 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 ITIH4Q14624 930 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 TSC22D1Q15714 1073 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 ATPAF2Q8N5M1 289 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 KCNB2Q92953 911 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 VTA1Q9NP79 307 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 WDR19Q8NEZ3 1342 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 TAF4O00268 1085 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 ZNF862O60290 1169 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 FAM20BO75063 409 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 FAM200BP0CF97 657 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 SMTNL2Q2TAL5 461 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 USP39Q53GS9 565 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 LRRC8DQ7L1W4 858 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 SYTL1Q8IYJ3 562 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 TBC1D19Q8N5T2 526 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 SERHL2Q9H4I8 314 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 SERHLQ9NQF3 203 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 TJP2Q9UDY2 1190 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 ADGRA3Q8IWK6 1321 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 PSMD3O43242 534 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 ALOX12P18054 663 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 DDI2Q5TDH0 399 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 HS6ST3Q8IZP7 471 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 FOPNLQ96NB1 174 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 TFR2Q9UP52 801 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 CDY2AQ9Y6F7 541 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 CDY1Q9Y6F8 540 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 PRAMEF22A3QJZ6 481 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 IQCA1LA6NCM1 817 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 EPB42P16452 691 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 FXR1P51114 621 aaKnown RBP eCLIP11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 GEMIN4P57678 1058 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 FMR1Q06787 632 aaKnown RBP eCLIP11.49□□□□□ -0.573e-6■■■□□ 15.8
GTF3C1-201ENST00000356183 ARMC4Q5T2S8 1044 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 TRIQKQ629K1 86 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 EPS8L3Q8TE67 593 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 CAPSLQ8WWF8 208 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 ZC3H4Q9UPT8 1303 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 PSTPIP1O43586 416 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 SNX30Q5VWJ9 437 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 DNAJC7Q99615 494 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 RBBP8Q99708 897 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 MRPL4Q9BYD3 311 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 SPASTQ9UBP0 616 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 LEMD3Q9Y2U8 911 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 KIF28PB7ZC32 967 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 E9PBE3 544 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 POU1F1P28069 291 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 PTPN12Q05209 780 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 FAM111AQ96PZ2 611 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 EIF2AK1Q9BQI3 630 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 CLEC4MQ9H2X3 399 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 AGPAT5Q9NUQ2 364 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 MED14O60244 1454 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 NCF1BA6NI72 391 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 NCF1CA8MVU1 366 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 SNRPAP09012 282 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 NCF1P14598 390 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 HSD17B3P37058 310 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 SLC29A2Q14542 456 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 NCF4Q15080 339 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 TSHZ1Q6ZSZ6 1077 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 FAM160B2Q86V87 743 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 RDM1Q8NG50 284 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 PI4KBQ9UBF8 816 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 GABBR1Q9UBS5 961 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 RUVBL2Q9Y230 463 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 ATP7BP35670 1465 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 CFAP99D6REC4 459 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 KPNA4O00629 521 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 AP5Z1O43299 807 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 FYNP06241 537 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 LTKP29376 864 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 CACNA2D1P54289 1103 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 SEMA3FQ13275 785 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 CNGA2Q16280 664 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 RFX7Q2KHR2 1363 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 FRMD5Q7Z6J6 570 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 JAMLQ86YT9 394 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 SLC44A2Q8IWA5 706 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 GRID1Q9ULK0 1009 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 PSMB9P28065 219 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 CYP51A1Q16850 503 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 ARMC3Q5W041 872 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 DCAF4Q8WV16 495 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 ACSF2Q96CM8 615 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 OLFM1Q99784 485 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 ROGDIQ9GZN7 287 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 LATS2Q9NRM7 1088 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 TOPORSQ9NS56 1045 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 SLC39A10Q9ULF5 831 aa11.48□□□□□ -0.57
GTF3C1-201ENST00000356183 USP17L10C9JJH3 530 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms