RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SERPINB1P30740 379 aa17.96■□□□□ 0.47
COL27A1-201ENST00000356083 CYP39A1Q9NYL5 469 aa17.96■□□□□ 0.47
COL27A1-201ENST00000356083 PHLPP2Q6ZVD8 1323 aa17.96■□□□□ 0.47
COL27A1-201ENST00000356083 MLH3Q9UHC1 1453 aa17.96■□□□□ 0.47
COL27A1-201ENST00000356083 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.96■□□□□ 0.47
COL27A1-201ENST00000356083 TMEM191CA6NGB0 347 aa17.96■□□□□ 0.47
COL27A1-201ENST00000356083 CHUKO15111 745 aa17.96■□□□□ 0.47
COL27A1-201ENST00000356083 RRM2P31350 389 aa17.96■□□□□ 0.47
COL27A1-201ENST00000356083 ZNF177Q13360 481 aaPredicted RBP17.96■□□□□ 0.47
COL27A1-201ENST00000356083 C16orf96A6NNT2 1141 aa17.96■□□□□ 0.47
COL27A1-201ENST00000356083 TRMT6Q9UJA5 497 aaKnown RBP17.96■□□□□ 0.47
COL27A1-201ENST00000356083 KIAA0232Q92628 1395 aa17.96■□□□□ 0.47
COL27A1-201ENST00000356083 GMNCA6NCL1 334 aa17.96■□□□□ 0.47
COL27A1-201ENST00000356083 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.96■□□□□ 0.47
COL27A1-201ENST00000356083 BTBD9Q96Q07 612 aa17.96■□□□□ 0.47
COL27A1-201ENST00000356083 DBR1Q9UK59 544 aaKnown RBP17.96■□□□□ 0.47
COL27A1-201ENST00000356083 RPN2P04844 631 aa17.96■□□□□ 0.46
COL27A1-201ENST00000356083 P3H1Q32P28 736 aa17.96■□□□□ 0.46
COL27A1-201ENST00000356083 R3HCC1LQ7Z5L2 792 aaKnown RBP17.96■□□□□ 0.46
COL27A1-201ENST00000356083 MOSPD2Q8NHP6 518 aa17.96■□□□□ 0.46
COL27A1-201ENST00000356083 UNC13DQ70J99 1090 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 LNPEPQ9UIQ6 1025 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 DIS3Q9Y2L1 958 aaKnown RBP17.95■□□□□ 0.46
COL27A1-201ENST00000356083 SH2B2O14492 632 aaPredicted RBP17.95■□□□□ 0.46
COL27A1-201ENST00000356083 PDGFRAP16234 1089 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 KCNK10P57789 538 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 TIGD7Q6NT04 549 aaPredicted RBP17.95■□□□□ 0.46
COL27A1-201ENST00000356083 S100A13Q99584 98 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 MGAT4DA6NG13 374 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 MAP3K6O95382 1288 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 C19orf18Q8NEA5 215 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 IL17REQ8NFR9 667 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 IPPQ9Y573 584 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 CYP21A2P08686 494 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 UMPSP11172 480 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 ATP6V1B1P15313 513 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 COX10Q12887 443 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 MTHFD1LQ6UB35 978 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 PHACTR1Q9C0D0 580 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 ANAPC2Q9UJX6 822 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 ALBP02768 609 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 WEE2P0C1S8 567 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 C3orf62Q6ZUJ4 267 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 RNF180Q86T96 592 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 DHX40Q8IX18 779 aaKnown RBP17.95■□□□□ 0.46
COL27A1-201ENST00000356083 IQCF2Q8IXL9 164 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 CYP4X1Q8N118 509 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 ZNF713Q8N859 430 aaPredicted RBP17.95■□□□□ 0.46
COL27A1-201ENST00000356083 TNIP2Q8NFZ5 429 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 UCMAQ8WVF2 138 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 WDCPQ9H6R7 721 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 MIEF1Q9NQG6 463 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 BLOC1S6Q9UL45 172 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 TRIM43BA6NCK2 446 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 HMGB3O15347 200 aaKnown RBP17.95■□□□□ 0.46
COL27A1-201ENST00000356083 TEX33O43247 280 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 SOX6P35712 828 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 PPP2R2AP63151 447 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 DGKKQ5KSL6 1271 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 RNF44Q7L0R7 432 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.95■□□□□ 0.46
COL27A1-201ENST00000356083 GLMNQ92990 594 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 STK33Q9BYT3 514 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 ROGDIQ9GZN7 287 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 CHST12Q9NRB3 414 aa17.95■□□□□ 0.46
COL27A1-201ENST00000356083 P4HBP07237 508 aaKnown RBP17.94■□□□□ 0.46
COL27A1-201ENST00000356083 SFNP31947 248 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 SRSF11Q05519 484 aaKnown RBP17.94■□□□□ 0.46
COL27A1-201ENST00000356083 ZSWIM7Q19AV6 140 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 TRIM10Q9UDY6 481 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 ASB14A6NK59 587 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 F5H6K3 240 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 FGFR2P21802 821 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 KLRC3Q07444 240 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 KLHL1Q9NR64 748 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 RAB23Q9ULC3 237 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 PLA2G4CQ9UP65 541 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 ENO4A6NNW6 628 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 CCDC188H7C350 402 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 PSMD3O43242 534 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 GSSP48637 474 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 CEP72Q9P209 647 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 PRPF3O43395 683 aaKnown RBP17.94■□□□□ 0.46
COL27A1-201ENST00000356083 ITGB6P18564 788 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 CHRNA5P30532 468 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 EPHX4Q8IUS5 362 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 CATSPER1Q8NEC5 780 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 OSBPL9Q96SU4 736 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 STAU1O95793 577 aaKnown RBP17.94■□□□□ 0.46
COL27A1-201ENST00000356083 CLCN6P51797 869 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 COG2Q14746 738 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 LRRC8DQ7L1W4 858 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 RNFT2Q96EX2 444 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 IL1RAPL1Q9NZN1 696 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 NPEPPSP55786 919 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 EFCAB12Q6NXP0 572 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 TRIM72Q6ZMU5 477 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 DDI1Q8WTU0 396 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 NMRK1Q9NWW6 199 aa17.94■□□□□ 0.46
COL27A1-201ENST00000356083 ACSL4O60488 711 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms