RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 ZBTB16Q05516 673 aa9.35□□□□□ -0.91
RBFOX1-203ENST00000355637 NFE2Q16621 373 aaPredicted RBP9.35□□□□□ -0.91
RBFOX1-203ENST00000355637 SPDYAQ5MJ70 313 aa9.35□□□□□ -0.91
RBFOX1-203ENST00000355637 TOM1L2Q6ZVM7 507 aa9.35□□□□□ -0.91
RBFOX1-203ENST00000355637 RAPH1Q70E73 1250 aa9.35□□□□□ -0.91
RBFOX1-203ENST00000355637 LURAP1LQ8IV03 231 aa9.35□□□□□ -0.91
RBFOX1-203ENST00000355637 SRRM1Q8IYB3 904 aaKnown RBP9.35□□□□□ -0.91
RBFOX1-203ENST00000355637 EPS8L3Q8TE67 593 aaKnown RBP9.35□□□□□ -0.91
RBFOX1-203ENST00000355637 ADAM7Q9H2U9 754 aa9.35□□□□□ -0.91
RBFOX1-203ENST00000355637 MOCS1Q9NZB8 636 aa9.35□□□□□ -0.91
RBFOX1-203ENST00000355637 CTNND2Q9UQB3 1225 aa9.35□□□□□ -0.91
RBFOX1-203ENST00000355637 RGPD2P0DJD1 1756 aa9.35□□□□□ -0.91
RBFOX1-203ENST00000355637 GOLGA8QA0A0J9YX86 632 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 GOLGA8OA6NCC3 632 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 NUTM2BA6NNL0 878 aaPredicted RBP9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 NUTM2EB1AL46 878 aaPredicted RBP9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 GOLGA8NF8WBI6 632 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 ESRRBO95718 433 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 NPPAP01160 153 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 GH1P01241 217 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 CREB1P16220 341 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 JAK1P23458 1154 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 ARHGDIAP52565 204 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 NUP107P57740 925 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 TMPRSS15P98073 1019 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 TAF1CQ15572 869 aaPredicted RBP9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 PPP2R5EQ16537 467 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 C4orf46Q504U0 113 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 PPP1R26Q5T8A7 1209 aaPredicted RBP9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 NANOGP8Q6NSW7 305 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 CYP20A1Q6UW02 462 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 TPTE2Q6XPS3 522 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 TCAIMQ8N3R3 496 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 CNBD2Q96M20 576 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 ACAT2Q9BWD1 397 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 TRPV6Q9H1D0 765 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 PFDN2Q9UHV9 154 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 NOSIPQ9Y314 301 aaKnown RBP9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 KDM3BQ7LBC6 1761 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 MAST3O60307 1309 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 KLF18A0A0U1RQI7 1052 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 EYA2O00167 538 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 BAIAP3O94812 1187 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 UFL1O94874 794 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 CTDNEP1O95476 244 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 OAS1P00973 400 aaKnown RBP9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 UQCRBP14927 111 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 PDIA3P30101 505 aaKnown RBP9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 LRPAP1P30533 357 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 AQP4P55087 323 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 PEX3P56589 373 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 CUL1Q13616 776 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 RAPGEF1Q13905 1077 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 MTERF2Q49AM1 385 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 BTBD8Q5XKL5 378 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 FAM122CQ6P4D5 195 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 RGS9BPQ6ZS82 235 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 ERI1Q8IV48 349 aaKnown RBP9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 DSCC1Q9BVC3 393 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 C12orf10Q9HB07 376 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 SEPT11Q9NVA2 429 aaKnown RBP9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 GGA3Q9NZ52 723 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 AMACRQ9UHK6 382 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 RNF112Q9ULX5 631 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 DNM3Q9UQ16 869 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 B8ZZF3 427 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 SPAG7O75391 227 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 PMLP29590 882 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 PGM1P36871 562 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 MAGEA4P43358 317 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 POLR2GP62487 172 aaKnown RBP eCLIP9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 PRAMEP78395 509 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 CSTF3Q12996 717 aaKnown RBP9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 KCTD2Q14681 263 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 TRIP13Q15645 432 aaPredicted RBP9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 FAM205BPQ63HN1 556 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 TMC3Q7Z5M5 1100 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 UNC45BQ8IWX7 931 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 LRRC71Q8N4P6 559 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 OSBP2Q969R2 916 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 MIPEPQ99797 713 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 ZMYND12Q9H0C1 365 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 AGPAT5Q9NUQ2 364 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 NCKIPSDQ9NZQ3 722 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 FAM8A1Q9UBU6 413 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 TBC1D30Q9Y2I9 924 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 SNX8Q9Y5X2 465 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 OVOS2A0A0G2JMS6 1433 aa9.34□□□□□ -0.91
RBFOX1-203ENST00000355637 FER1L4A9Z1Z3 1794 aa9.33□□□□□ -0.92
RBFOX1-203ENST00000355637 TSPAN4O14817 238 aa9.33□□□□□ -0.92
RBFOX1-203ENST00000355637 CLOCKO15516 846 aa9.33□□□□□ -0.92
RBFOX1-203ENST00000355637 CCDC22O60826 627 aa9.33□□□□□ -0.92
RBFOX1-203ENST00000355637 CIB2O75838 187 aa9.33□□□□□ -0.92
RBFOX1-203ENST00000355637 OR5F1O95221 314 aa9.33□□□□□ -0.92
RBFOX1-203ENST00000355637 PLEKP08567 350 aaPredicted RBP9.33□□□□□ -0.92
RBFOX1-203ENST00000355637 CCDC130P13994 396 aa9.33□□□□□ -0.92
RBFOX1-203ENST00000355637 CDH2P19022 906 aaPredicted RBP9.33□□□□□ -0.92
RBFOX1-203ENST00000355637 CXCR2P25025 360 aa9.33□□□□□ -0.92
RBFOX1-203ENST00000355637 PBX1P40424 430 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms