RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TFR2Q9UP52 801 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 FAM32AQ9Y421 112 aaKnown RBP13.79□□□□□ -0.2
SCN8A-202ENST00000355133 AKAP10O43572 662 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 RHOBTB1O94844 696 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 ICAM1P05362 532 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 PGK2P07205 417 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 ODC1P11926 461 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 EZH2Q15910 746 aaKnown RBP13.79□□□□□ -0.2
SCN8A-202ENST00000355133 DDX42Q86XP3 938 aaKnown RBP eCLIP13.79□□□□□ -0.2
SCN8A-202ENST00000355133 CALML6Q8TD86 181 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 CINPQ9BW66 212 aaPredicted RBP13.79□□□□□ -0.2
SCN8A-202ENST00000355133 TUBE1Q9UJT0 475 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 CDYLQ9Y232 598 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 CROCC2H7BZ55 1655 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 FKBP9O95302 570 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 CTDNEP1O95476 244 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 EPHB2P29323 1055 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 RGS4P49798 205 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 SNRPFP62306 86 aaKnown RBP13.79□□□□□ -0.2
SCN8A-202ENST00000355133 XRRA1Q6P2D8 792 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 FKBP9P1Q75LS8 142 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 LONP2Q86WA8 852 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 TC2NQ8N9U0 490 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 AGBL3Q8NEM8 1001 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.79□□□□□ -0.2
SCN8A-202ENST00000355133 M0QYT0 321 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 TCN1P20061 433 aaPredicted RBP13.78□□□□□ -0.2
SCN8A-202ENST00000355133 PTGER2P43116 358 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 HDAC4P56524 1084 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 CDH18Q13634 790 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 RUBCNQ92622 972 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 ZNF669Q96BR6 464 aaPredicted RBP13.78□□□□□ -0.2
SCN8A-202ENST00000355133 IL1RL2Q9HB29 575 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.78□□□□□ -0.2
SCN8A-202ENST00000355133 SLC39A10Q9ULF5 831 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 ADGRB3O60242 1522 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 PRR23AA6NEV1 266 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 AIM2O14862 343 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 SRP72O76094 671 aaKnown RBP13.78□□□□□ -0.2
SCN8A-202ENST00000355133 GYPCP04921 128 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 CUL2Q13617 745 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 PAN2Q504Q3 1202 aaKnown RBP13.78□□□□□ -0.2
SCN8A-202ENST00000355133 TTC39BQ5VTQ0 682 aaPredicted RBP13.78□□□□□ -0.2
SCN8A-202ENST00000355133 MKNK1Q9BUB5 465 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 AGPAT3Q9NRZ7 376 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 RNF17Q9BXT8 1623 aaKnown RBP13.78□□□□□ -0.2
SCN8A-202ENST00000355133 FAM47DPA6NHR8 397 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 CFAP99D6REC4 459 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 PMPCBO75439 489 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 DGKIO75912 1065 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 MZF1P28698 734 aaPredicted RBP13.78□□□□□ -0.2
SCN8A-202ENST00000355133 PNPLA4P41247 253 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 PLA2G4AP47712 749 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 ARHGAP15Q53QZ3 475 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 ZNF677Q86XU0 584 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 UBQLN1Q9UMX0 589 aaKnown RBP13.78□□□□□ -0.2
SCN8A-202ENST00000355133 RSPH10B2B2RC85 870 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 PPP1R37O75864 691 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 RSPH10BP0C881 870 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 CLCN3P51790 818 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 TJAP1Q5JTD0 557 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 FAXCQ5TGI0 409 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 MROH9Q5TGP6 573 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 LRIG3Q6UXM1 1119 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 CCDC33Q8N5R6 958 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 PRMT6Q96LA8 375 aaPredicted RBP13.78□□□□□ -0.2
SCN8A-202ENST00000355133 DDIT4Q9NX09 232 aa13.78□□□□□ -0.2
SCN8A-202ENST00000355133 CYP11B2P19099 503 aa13.77□□□□□ -0.2
SCN8A-202ENST00000355133 SOAT1P35610 550 aa13.77□□□□□ -0.2
SCN8A-202ENST00000355133 CARSP49589 748 aaKnown RBP13.77□□□□□ -0.2
SCN8A-202ENST00000355133 GTF2A2P52657 109 aa13.77□□□□□ -0.2
SCN8A-202ENST00000355133 ZNF555Q8NEP9 628 aa13.77□□□□□ -0.2
SCN8A-202ENST00000355133 WDCPQ9H6R7 721 aa13.77□□□□□ -0.2
SCN8A-202ENST00000355133 NSMCE4AQ9NXX6 385 aa13.77□□□□□ -0.2
SCN8A-202ENST00000355133 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.77□□□□□ -0.2
SCN8A-202ENST00000355133 CRLS1Q9UJA2 301 aa13.77□□□□□ -0.2
SCN8A-202ENST00000355133 ARHGAP26Q9UNA1 814 aa13.77□□□□□ -0.2
SCN8A-202ENST00000355133 A0A1W2PQJ5 194 aa13.77□□□□□ -0.2
SCN8A-202ENST00000355133 P4HA2O15460 535 aa13.77□□□□□ -0.2
SCN8A-202ENST00000355133 SNRPAP09012 282 aaKnown RBP13.77□□□□□ -0.2
SCN8A-202ENST00000355133 KLRC1P26715 233 aa13.77□□□□□ -0.2
SCN8A-202ENST00000355133 RFX5P48382 616 aaPredicted RBP13.77□□□□□ -0.2
SCN8A-202ENST00000355133 CCNI2Q6ZMN8 369 aaPredicted RBP13.77□□□□□ -0.2
SCN8A-202ENST00000355133 TFB1MQ8WVM0 346 aaKnown RBP13.77□□□□□ -0.2
SCN8A-202ENST00000355133 FAM162AQ96A26 154 aa13.77□□□□□ -0.2
SCN8A-202ENST00000355133 MAP3K14Q99558 947 aa13.77□□□□□ -0.2
SCN8A-202ENST00000355133 C17orf80Q9BSJ5 609 aa13.77□□□□□ -0.2
SCN8A-202ENST00000355133 PPP1R3GB7ZBB8 358 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 ACO1P21399 889 aaKnown RBP13.77□□□□□ -0.21
SCN8A-202ENST00000355133 CAP2P40123 477 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 SERPINB4P48594 390 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 ZNF473Q8WTR7 871 aaKnown RBP13.77□□□□□ -0.21
SCN8A-202ENST00000355133 PDLIM2Q96JY6 352 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 THAP2Q9H0W7 228 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 EPN3Q9H201 632 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 CDC42BPBQ9Y5S2 1711 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 CNTNAP4Q9C0A0 1308 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 EFCAB14O75071 495 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 AP1G2O75843 785 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 MAP3K6O95382 1288 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms