RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 SLC35F6Q8N357 371 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 RSPH1Q8WYR4 309 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 NOX5Q96PH1 765 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 STXBP5LQ9Y2K9 1186 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 CEP83Q9Y592 693 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 NME7Q9Y5B8 376 aa16.59■□□□□ 0.25
CTSA-202ENST00000354880 MYH10P35580 1976 aa16.58■□□□□ 0.24
CTSA-202ENST00000354880 BUB1O43683 1085 aa16.58■□□□□ 0.24
CTSA-202ENST00000354880 B4GALT3O60512 393 aa16.58■□□□□ 0.24
CTSA-202ENST00000354880 MOCS3O95396 460 aa16.58■□□□□ 0.24
CTSA-202ENST00000354880 GPC5P78333 572 aa16.58■□□□□ 0.24
CTSA-202ENST00000354880 CNGA2Q16280 664 aa16.58■□□□□ 0.24
CTSA-202ENST00000354880 PAN2Q504Q3 1202 aaKnown RBP16.58■□□□□ 0.24
CTSA-202ENST00000354880 TIGD5Q53EQ6 642 aa16.58■□□□□ 0.24
CTSA-202ENST00000354880 WSCD1Q658N2 575 aa16.58■□□□□ 0.24
CTSA-202ENST00000354880 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.58■□□□□ 0.245e-11■■■■□ 24.7
CTSA-202ENST00000354880 ACOT1Q86TX2 421 aa16.58■□□□□ 0.24
CTSA-202ENST00000354880 TMEM86AQ8N2M4 240 aa16.58■□□□□ 0.24
CTSA-202ENST00000354880 TRIM58Q8NG06 486 aa16.58■□□□□ 0.24
CTSA-202ENST00000354880 DNAI2Q9GZS0 605 aa16.58■□□□□ 0.24
CTSA-202ENST00000354880 CAPN6Q9Y6Q1 641 aa16.58■□□□□ 0.24
CTSA-202ENST00000354880 NCANO14594 1321 aa16.58■□□□□ 0.24
CTSA-202ENST00000354880 ABHD14A-ACY1A0A1B0GW23 586 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 O00370 1275 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 FANCGO15287 622 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 PDGFRBP09619 1106 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 LMO2P25791 158 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 CASQ1P31415 396 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 CDH5P33151 784 aaPredicted RBP16.57■□□□□ 0.24
CTSA-202ENST00000354880 GATMP50440 423 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 STILQ15468 1287 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 CD300LGQ6UXG3 332 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.57■□□□□ 0.24
CTSA-202ENST00000354880 TMEM35BQ8NCS4 154 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 HASPINQ8TF76 798 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 RFFLQ8WZ73 363 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 ARHGEF26Q96DR7 871 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 ALS2CR12Q96Q35 445 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 MRPL9Q9BYD2 267 aaKnown RBP16.57■□□□□ 0.24
CTSA-202ENST00000354880 ZNF518BQ9C0D4 1074 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 LHX5Q9H2C1 402 aa16.57■□□□□ 0.24
CTSA-202ENST00000354880 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.57■□□□□ 0.24
CTSA-202ENST00000354880 GABRDO14764 452 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 KIF4AO95239 1232 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 PFKMP08237 780 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 ODC1P11926 461 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 NOP2P46087 812 aaKnown RBP16.56■□□□□ 0.24
CTSA-202ENST00000354880 OR1G1P47890 313 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 LHX1P48742 406 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 IFI16Q16666 785 aaKnown RBP16.56■□□□□ 0.24
CTSA-202ENST00000354880 OSTM1Q86WC4 334 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 PHF13Q86YI8 300 aaPredicted RBP16.56■□□□□ 0.24
CTSA-202ENST00000354880 MCOLN2Q8IZK6 566 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 CRYBG2Q8N1P7 616 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 C12orf29Q8N999 325 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 ZNF653Q96CK0 615 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 TNIP3Q96KP6 325 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 DPEP3Q9H4B8 488 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 DNAJB4Q9UDY4 337 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 GTF3C4Q9UKN8 822 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 LTBP2Q14767 1821 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 TBKBP1A7MCY6 615 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 TMEM189-UBE2V1I3L0A0 370 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 M0QZQ0 153 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 HCRTO43612 131 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 UPP2O95045 317 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 ITGB1P05556 798 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 BRCC3P46736 316 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 DENND1BQ6P3S1 775 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 LCLAT1Q6UWP7 414 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 MON1BQ7L1V2 547 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 RHOT2Q8IXI1 618 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 C1orf131Q8NDD1 294 aaKnown RBP16.56■□□□□ 0.24
CTSA-202ENST00000354880 SLC35G2Q8TBE7 412 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 TRIM11Q96F44 468 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 VCPIP1Q96JH7 1222 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 NRDE2Q9H7Z3 1164 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 ADAM22Q9P0K1 906 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 PRKAG2Q9UGJ0 569 aa16.56■□□□□ 0.24
CTSA-202ENST00000354880 TIMM13Q9Y5L4 95 aaPredicted RBP16.56■□□□□ 0.24
CTSA-202ENST00000354880 FNDC1Q4ZHG4 1894 aaPredicted RBP16.56■□□□□ 0.24
CTSA-202ENST00000354880 LAMA2P24043 3122 aaKnown RBP16.56■□□□□ 0.24
CTSA-202ENST00000354880 ARHGEF37A1IGU5 675 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 F8W810 466 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 I3L4J1 428 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 M0QYV0 167 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 EFCAB14O75071 495 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 MICAL2O94851 1124 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 MYBL1P10243 752 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 PPP1R26Q5T8A7 1209 aaPredicted RBP16.55■□□□□ 0.24
CTSA-202ENST00000354880 WDTC1Q8N5D0 677 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 SPATA18Q8TC71 538 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 SUSD3Q96L08 255 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 OSGEPQ9NPF4 335 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 DDX43Q9NXZ2 648 aaKnown RBP16.55■□□□□ 0.24
CTSA-202ENST00000354880 TSPAN16Q9UKR8 245 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 DSEQ9UL01 958 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 PCDHGC5Q9Y5F6 944 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 ALPK3Q96L96 1907 aa16.55■□□□□ 0.24
CTSA-202ENST00000354880 CTAGE9A4FU28 777 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms