RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 PCYT2Q99447 389 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 ELP3Q9H9T3 547 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 CISHQ9NSE2 258 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 BTBD7Q9P203 1132 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 CLUHO75153 1309 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 DOCK5Q9H7D0 1870 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.93□□□□□ -1.78
RNF38-203ENST00000353739 DPYSL4O14531 572 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 ATP5HO75947 161 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 TXNP10599 105 aaKnown RBP3.93□□□□□ -1.78
RNF38-203ENST00000353739 ATP4AP20648 1035 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 PCK1P35558 622 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 ASPAP45381 313 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 ACADSBP45954 432 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 TFAMQ00059 246 aaKnown RBP3.93□□□□□ -1.78
RNF38-203ENST00000353739 KLF1Q13351 362 aaPredicted RBP3.93□□□□□ -1.78
RNF38-203ENST00000353739 TMEM132DQ14C87 1099 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 RNF187Q5TA31 235 aaPredicted RBP3.93□□□□□ -1.78
RNF38-203ENST00000353739 EFCAB12Q6NXP0 572 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 BZW1Q7L1Q6 419 aaKnown RBP3.93□□□□□ -1.78
RNF38-203ENST00000353739 DEFB132Q7Z7B7 95 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 PNMA8AQ86V59 439 aaPredicted RBP3.93□□□□□ -1.78
RNF38-203ENST00000353739 DDX42Q86XP3 938 aaKnown RBP eCLIP3.93□□□□□ -1.78
RNF38-203ENST00000353739 PPIL6Q8IXY8 311 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 BEST2Q8NFU1 509 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 NKD2Q969F2 451 aaPredicted RBP3.93□□□□□ -1.78
RNF38-203ENST00000353739 L3MBTL3Q96JM7 780 aaPredicted RBP3.93□□□□□ -1.78
RNF38-203ENST00000353739 MAGEB18Q96M61 343 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 ZNF560Q96MR9 790 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 TBCBQ99426 244 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 PI4K2AQ9BTU6 479 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 TRIM7Q9C029 511 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 PTPRHQ9HD43 1115 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 SLC12A6Q9UHW9 1150 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 USTQ9Y2C2 406 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 NUB1Q9Y5A7 615 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 UMODL1Q5DID0 1318 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 VCANP13611 3396 aa3.93□□□□□ -1.78
RNF38-203ENST00000353739 HNRNPCL1O60812 293 aaKnown RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 SUN1O94901 812 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 CD4P01730 458 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 RALAP11233 206 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 HARSP12081 509 aaKnown RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 CHN1P15882 459 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 GRM5P41594 1212 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 SP2Q02086 613 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 GUCY1A3Q02108 690 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 RNASELQ05823 741 aaKnown RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 DGKZQ13574 1117 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 ZC3H12AQ5D1E8 599 aaKnown RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 TNFAIP8L3Q5GJ75 292 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 GPAT2Q6NUI2 795 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 TTC27Q6P3X3 843 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 SESTD1Q86VW0 696 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 UNC93AQ86WB7 457 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 CCDC25Q86WR0 208 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 CDKL3Q8IVW4 592 aaPredicted RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 TRIM42Q8IWZ5 723 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 CCDC13Q8IYE1 715 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 FBXO25Q8TCJ0 367 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 TEKT4Q8WW24 435 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 RAPGEF5Q92565 580 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 CDCA5Q96FF9 252 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 TMEM176AQ96HP8 235 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 ACAP3Q96P50 834 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 PARK7Q99497 189 aaKnown RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 SGIP1Q9BQI5 828 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 TUBB6Q9BUF5 446 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 MTMR12Q9C0I1 747 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 CDC42EP4Q9H3Q1 356 aaKnown RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 APOBEC3GQ9HC16 384 aaKnown RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 hCG_1818297A0A087WSY0 165 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 INO80B-WBP1J3KQ70 363 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 DNAJC8O75937 253 aaPredicted RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 STK10O94804 968 aaKnown RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 SRGAP2CP0DJJ0 459 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 KRT3P12035 628 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 GPD1P21695 349 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 KLRC2P26717 231 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 MRPS25P82663 173 aaKnown RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 ACTN3Q08043 901 aaPredicted RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 CCDC15Q0P6D6 951 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 SLC29A2Q14542 456 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 SEPT7Q16181 437 aaKnown RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 PTPROQ16827 1216 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 LGSNQ5TDP6 509 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 RHBDF2Q6PJF5 856 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 ADAT2Q7Z6V5 191 aaKnown RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 HACE1Q8IYU2 909 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 SH2D3CQ8N5H7 860 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 ATP11CQ8NB49 1132 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 ZSWIM2Q8NEG5 633 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.92□□□□□ -1.78
RNF38-203ENST00000353739 C1orf54Q8WWF1 131 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 FAM212AQ96EL1 285 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 OTUD5Q96G74 571 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 SEC16BQ96JE7 1060 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 MCEEQ96PE7 176 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 KATNAL1Q9BW62 490 aa3.92□□□□□ -1.78
RNF38-203ENST00000353739 PPANQ9NQ55 473 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms