RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SLC7A8Q9UHI5 535 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 SPATA31A1Q5TZJ5 1347 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 TISP43B9A030 160 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 ZNF862O60290 1169 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 PDE5AO76074 875 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 NTSR2O95665 410 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 PABPC4LP0CB38 370 aaKnown RBP8.02□□□□□ -1.13
BRCA1-201ENST00000352993 CCDC166P0CW27 439 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 GYS1P13807 737 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 VCLP18206 1134 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 GCAP28676 217 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 MXI1P50539 228 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 VAMP7P51809 220 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 HPCAP84074 193 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 DLG1Q12959 904 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 MPP3Q13368 585 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 TMEM259Q4ZIN3 620 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 C1orf228Q6PIY5 440 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 CTAGE3PQ8IX95 158 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 EFCAB3Q8N7B9 438 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 GLIS1Q8NBF1 620 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 PSPC1Q8WXF1 523 aaKnown RBP8.02□□□□□ -1.13
BRCA1-201ENST00000352993 GPR101Q96P66 508 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-201ENST00000352993 EIF2AK1Q9BQI3 630 aaKnown RBP8.02□□□□□ -1.13
BRCA1-201ENST00000352993 ARHGEF38Q9NXL2 777 aa8.02□□□□□ -1.13
BRCA1-201ENST00000352993 A0A0J9YVX5 310 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 SMIM31A0A1B0GVY4 71 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 SPDYE16A6NNV3 312 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-201ENST00000352993 K7ENM7 598 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 PPP1R11O60927 126 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-201ENST00000352993 SPATA31C1P0DKV0 1188 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 POLD1P28340 1107 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 IRX4P78413 519 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 ARHGAP4P98171 946 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 ZYXQ15942 572 aaKnown RBP8.01□□□□□ -1.13
BRCA1-201ENST00000352993 GRIK5Q16478 980 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 SYCP2LQ5T4T6 812 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 C1QTNF12Q5T7M4 302 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 RHPN2Q8IUC4 686 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 OGFOD1Q8N543 542 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 ETNPPLQ8TBG4 499 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 PAFAH2Q99487 392 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 DDX43Q9NXZ2 648 aaKnown RBP8.01□□□□□ -1.13
BRCA1-201ENST00000352993 BTBD7Q9P203 1132 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 APPL1Q9UKG1 709 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 ROBO3Q96MS0 1386 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 F8W8V4 182 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 TYROBPO43914 113 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 ABHD2P08910 425 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 GZMAP12544 262 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 UQCRBP14927 111 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 PEX2P28328 305 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 CRABP2P29373 138 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 GRIA2P42262 883 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 CHN2P52757 468 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 MFAP3P55082 362 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 DYNLT1P63172 113 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 SLC25A3Q00325 362 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 CENPCQ03188 943 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 PPP3CAQ08209 521 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 ACAP1Q15027 740 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 HIF1AQ16665 826 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 DNAL1Q4LDG9 190 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 LRRC8BQ6P9F7 803 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 DHDDSQ86SQ9 333 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 POU5F2Q8N7G0 328 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 DHX38Q92620 1227 aaKnown RBP8.01□□□□□ -1.13
BRCA1-201ENST00000352993 SLCO2A1Q92959 643 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 C8orf37Q96NL8 207 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 CCDC28BQ9BUN5 200 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 HOMER2Q9NSB8 354 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-201ENST00000352993 DNPEPQ9ULA0 475 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 ZBTB5O15062 677 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 INHBAP08476 426 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 FAM163BP0C2L3 166 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 ACTR3P61158 418 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 ZNF200P98182 395 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-201ENST00000352993 FMO1Q01740 532 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 CCNG2Q16589 344 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 SPDYAQ5MJ70 313 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 DPY19L2Q6NUT2 758 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 TREML1Q86YW5 311 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 PASD1Q8IV76 773 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 NCSTNQ92542 709 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 CNBD2Q96M20 576 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 SLC13A1Q9BZW2 595 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 CYLDQ9NQC7 956 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 NDUFA13Q9P0J0 144 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 TAGLN3Q9UI15 199 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 ZNF652Q9Y2D9 606 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 ZNF510Q9Y2H8 683 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 CACNA1SQ13698 1873 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 MYH11P35749 1972 aa8.01□□□□□ -1.13
BRCA1-201ENST00000352993 UBR3Q6ZT12 1888 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 A0A1B0GUL6 1792 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 C15orf38-AP3S2A0A0A6YYH1 394 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 DNALI1O14645 258 aaPredicted RBP8□□□□□ -1.13
BRCA1-201ENST00000352993 NDC80O14777 642 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 FKBP6O75344 327 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms