RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 CASP4P49662 377 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 CLCN4P51793 760 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 JAM2P57087 298 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 ACTR2P61160 394 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 POLR2FP61218 127 aaKnown RBP8.85□□□□□ -0.99
CD44-205ENST00000352818 AMPD2Q01433 879 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 KRT17Q04695 432 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 PRKCQQ04759 706 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 SRSF1Q07955 248 aaKnown RBP eCLIP8.85□□□□□ -0.99
CD44-205ENST00000352818 TMEM62Q0P6H9 643 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 ZC2HC1CQ53FD0 456 aaPredicted RBP8.85□□□□□ -0.99
CD44-205ENST00000352818 ZBTB41Q5SVQ8 909 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 CCDC122Q5T0U0 273 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 KLHDC7AQ5VTJ3 777 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 KIAA1211LQ6NV74 962 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 MIS18BP1Q6P0N0 1132 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 ABHD15Q6UXT9 468 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 GBP6Q6ZN66 633 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 CEP112Q8N8E3 955 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 MCPH1Q8NEM0 835 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 CMASQ8NFW8 434 aaPredicted RBP8.85□□□□□ -0.99
CD44-205ENST00000352818 ZNF707Q96C28 371 aaPredicted RBP8.85□□□□□ -0.99
CD44-205ENST00000352818 NTPCRQ9BSD7 190 aaKnown RBP8.85□□□□□ -0.99
CD44-205ENST00000352818 IRX2Q9BZI1 471 aaPredicted RBP8.85□□□□□ -0.99
CD44-205ENST00000352818 PDCL3Q9H2J4 239 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 DEF6Q9H4E7 631 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 SIX2Q9NPC8 291 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 LUC7LQ9NQ29 371 aaKnown RBP8.85□□□□□ -0.99
CD44-205ENST00000352818 RGS18Q9NS28 235 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 KCNG1Q9UIX4 513 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 EXOC7Q9UPT5 735 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 USP20Q9Y2K6 914 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 FRMD4BQ9Y2L6 1034 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 NEUROG3Q9Y4Z2 214 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 PPME1Q9Y570 386 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 MIA3Q5JRA6 1907 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 TICRRQ7Z2Z1 1910 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 CACNA1EQ15878 2313 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 IGKV6D-21A0A0A0MT36 114 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 RCCD1A6NED2 376 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 BTNL10A8MVZ5 291 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 CHURC1-FNTBB4DL54 471 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 CLIC2O15247 247 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 AKR1B10O60218 316 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 DGAT1O75907 488 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 GFPT2O94808 682 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 PLEKP08567 350 aaPredicted RBP8.84□□□□□ -0.99
CD44-205ENST00000352818 UCHL3P15374 230 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 H2AFXP16104 143 aaPredicted RBP8.84□□□□□ -0.99
CD44-205ENST00000352818 PPM1AP35813 382 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 FMO5P49326 533 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 FNTBP49356 437 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 PRKCEQ02156 737 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 C19orf57Q0VDD7 668 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 KIF5AQ12840 1032 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 BFSP1Q12934 665 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 PAK2Q13177 524 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 ELF2Q15723 593 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 ASIC2Q16515 512 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 XKR9Q5GH70 373 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 XKR3Q5GH77 459 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 DCAF17Q5H9S7 520 aaPredicted RBP8.84□□□□□ -0.99
CD44-205ENST00000352818 PLA2G2CQ5R387 149 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 C10orf76Q5T2E6 689 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 SH3PXD2AQ5TCZ1 1133 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 PAPD7Q5XG87 772 aaKnown RBP8.84□□□□□ -0.99
CD44-205ENST00000352818 PARM1Q6UWI2 310 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 MAMSTRQ6ZN01 415 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 INTS8Q75QN2 995 aaKnown RBP8.84□□□□□ -0.99
CD44-205ENST00000352818 ANO5Q75V66 913 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 RSRC2Q7L4I2 434 aaKnown RBP8.84□□□□□ -0.99
CD44-205ENST00000352818 TRAPPC11Q7Z392 1133 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 SRGAP1Q7Z6B7 1085 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 MAP4K3Q8IVH8 894 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 SYCP3Q8IZU3 236 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 VPS52Q8N1B4 723 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 PDCL2Q8N4E4 241 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 TRIM58Q8NG06 486 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 TMEM40Q8WWA1 233 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 PIK3R5Q8WYR1 880 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 GOLGA1Q92805 767 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 ADAM2Q99965 735 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 CARD6Q9BX69 1037 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 TMEM117Q9H0C3 514 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 FAM49AQ9H0Q0 323 aaPredicted RBP8.84□□□□□ -0.99
CD44-205ENST00000352818 ARRDC1-AS1Q9H2J1 176 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 GCNT4Q9P109 453 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 GABBR1Q9UBS5 961 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 GUCA1BQ9UMX6 200 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 MSRB2Q9Y3D2 182 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 PCDHA13Q9Y5I0 950 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 RAI2Q9Y5P3 530 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 MYH9P35579 1960 aaKnown RBP8.84□□□□□ -0.99
CD44-205ENST00000352818 F5P12259 2224 aa8.84□□□□□ -0.99
CD44-205ENST00000352818 ZNF862O60290 1169 aa8.83□□□□□ -1
CD44-205ENST00000352818 EXOC3O60645 756 aa8.83□□□□□ -1
CD44-205ENST00000352818 LILRB3O75022 631 aa8.83□□□□□ -1
CD44-205ENST00000352818 TACC1O75410 805 aa8.83□□□□□ -1
CD44-205ENST00000352818 RFPL2O75678 378 aa8.83□□□□□ -1
CD44-205ENST00000352818 PAPLNO95428 1278 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms