RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 MAN1A1P33908 653 aa15□□□□□ -0.01
RLIM-202ENST00000349225 MPP3Q13368 585 aa15□□□□□ -0.01
RLIM-202ENST00000349225 MED21Q13503 144 aa15□□□□□ -0.01
RLIM-202ENST00000349225 TFDP1Q14186 410 aa15□□□□□ -0.01
RLIM-202ENST00000349225 MAP7Q14244 749 aa15□□□□□ -0.01
RLIM-202ENST00000349225 RASA3Q14644 834 aa15□□□□□ -0.01
RLIM-202ENST00000349225 CCNG2Q16589 344 aa15□□□□□ -0.01
RLIM-202ENST00000349225 C1orf146Q5VVC0 180 aa15□□□□□ -0.01
RLIM-202ENST00000349225 ZNF720Q7Z2F6 126 aa15□□□□□ -0.01
RLIM-202ENST00000349225 DDX1Q92499 740 aaKnown RBP15□□□□□ -0.01
RLIM-202ENST00000349225 RTFDC1Q9BY42 306 aaPredicted RBP15□□□□□ -0.01
RLIM-202ENST00000349225 VPS11Q9H270 941 aa15□□□□□ -0.01
RLIM-202ENST00000349225 MTMR4Q9NYA4 1195 aa15□□□□□ -0.01
RLIM-202ENST00000349225 UVRAGQ9P2Y5 699 aa15□□□□□ -0.01
RLIM-202ENST00000349225 DNAJB4Q9UDY4 337 aa15□□□□□ -0.01
RLIM-202ENST00000349225 DENND3A2RUS2 1198 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 DNALI1O14645 258 aaPredicted RBP14.99□□□□□ -0.01
RLIM-202ENST00000349225 TAS2R40P59535 323 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 MSS51Q4VC12 460 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 SH3D19Q5HYK7 790 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 DHDDSQ86SQ9 333 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 LARGE2Q8N3Y3 721 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 ANO3Q9BYT9 981 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 S100A14Q9HCY8 104 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 SSU72Q9NP77 194 aaKnown RBP14.99□□□□□ -0.01
RLIM-202ENST00000349225 INIPQ9NRY2 104 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 VAV3Q9UKW4 847 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 FRMD4BQ9Y2L6 1034 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 COL24A1Q17RW2 1714 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 GOLGA8SH3BPF8 625 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 GOLGA8MH3BSY2 632 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 SLITRK3O94933 977 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 CENPCQ03188 943 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 CBX3Q13185 183 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 PDK3Q15120 406 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 SF3B3Q15393 1217 aaKnown RBP14.99□□□□□ -0.01
RLIM-202ENST00000349225 ASPRV1Q53RT3 343 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 PPP1R18Q6NYC8 613 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 C1orf186Q6ZWK4 172 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 ZFP28Q8NHY6 868 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 USP6NLQ92738 828 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 PCIF1Q9H4Z3 704 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 DNPEPQ9ULA0 475 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 RABGAP1Q9Y3P9 1069 aa14.99□□□□□ -0.01
RLIM-202ENST00000349225 MYOCOSA0A1B0GUC4 107 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 EIF4BP23588 611 aaKnown RBP14.98□□□□□ -0.01
RLIM-202ENST00000349225 CPOXP36551 454 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 RGS2P41220 211 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 ZNF543Q08ER8 600 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 KCTD1Q719H9 257 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 DHRS4Q9BTZ2 278 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 UBAP1Q9NZ09 502 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 HEMK1Q9Y5R4 338 aaPredicted RBP14.98□□□□□ -0.01
RLIM-202ENST00000349225 ALOX15BO15296 676 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 TGDSO95455 350 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 LDHBP07195 334 aaKnown RBP14.98□□□□□ -0.01
RLIM-202ENST00000349225 CYP11B1P15538 503 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 TAL1P17542 331 aaPredicted RBP14.98□□□□□ -0.01
RLIM-202ENST00000349225 MAPK4P31152 587 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 CRKLP46109 303 aaKnown RBP14.98□□□□□ -0.01
RLIM-202ENST00000349225 PPP4CP60510 307 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 NADK2Q4G0N4 442 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 MTBPQ96DY7 904 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 TMEM117Q9H0C3 514 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 RANBP17Q9H2T7 1088 aaKnown RBP14.98□□□□□ -0.01
RLIM-202ENST00000349225 CNTN3Q9P232 1028 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 TDRKHQ9Y2W6 561 aaKnown RBP14.98□□□□□ -0.01
RLIM-202ENST00000349225 SBF2Q86WG5 1849 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 MEIS2O14770 477 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 ADARP55265 1226 aaKnown RBP14.98□□□□□ -0.01
RLIM-202ENST00000349225 ZYXQ15942 572 aaKnown RBP14.98□□□□□ -0.01
RLIM-202ENST00000349225 SLC15A2Q16348 729 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 DHX38Q92620 1227 aaKnown RBP14.98□□□□□ -0.01
RLIM-202ENST00000349225 SEMA4DQ92854 862 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 SERAC1Q96JX3 654 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 EIF2AK1Q9BQI3 630 aaKnown RBP14.98□□□□□ -0.01
RLIM-202ENST00000349225 GPAMQ9HCL2 828 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 KLHL11Q9NVR0 708 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 SLC24A2Q9UI40 661 aa14.98□□□□□ -0.01
RLIM-202ENST00000349225 C15orf38-AP3S2A0A0A6YYH1 394 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 OATP04181 439 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 CD58P19256 250 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 RFX1P22670 979 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 GK3PQ14409 553 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 ADGRD1Q6QNK2 874 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 GSTA5Q7RTV2 222 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 ARPINQ7Z6K5 226 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 SLFN12Q8IYM2 578 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 DCAKDQ8WVC6 231 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 HSPBAP1Q96EW2 488 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 FAM111AQ96PZ2 611 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 SETDB2Q96T68 719 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 ARHGEF38Q9NXL2 777 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 BOLA2-SMG1P6H3BVE0 249 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 SLC26A4O43511 780 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 SUPT3HO75486 399 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 FAM13AO94988 1023 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 HNRNPCP07910 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
RLIM-202ENST00000349225 GLRA2P23416 452 aa14.97□□□□□ -0.01
RLIM-202ENST00000349225 SLC1A1P43005 524 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms