RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 HPDLQ96IR7 371 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 CAPS2Q9BXY5 557 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 A6NNZ2 444 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 GRM5P41594 1212 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 PMS2P54278 862 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 CDC42EP1Q00587 391 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 KRT17Q04695 432 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 TUBB8Q3ZCM7 444 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 KDM7AQ6ZMT4 941 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 RCOR2Q8IZ40 523 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 NIPA2Q8N8Q9 360 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 ATG4AQ8WYN0 398 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 HEMGNQ9BXL5 484 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 ADAMTS10Q9H324 1103 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 AGAP1Q9UPQ3 857 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 CENPFP49454 3210 aa21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 STAU1O95793 577 aaKnown RBP21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 CETN2P41208 172 aa21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 EIF3BP55884 814 aaKnown RBP21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 IRX5P78411 483 aaPredicted RBP21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 RBP5P82980 135 aa21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 OGDHQ02218 1023 aa21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 PTPN11Q06124 597 aaPredicted RBP21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 DCAF4L1Q3SXM0 396 aa21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 PTPN20Q4JDL3 420 aa21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 CYP4A22Q5TCH4 519 aa21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 TMEM176AQ96HP8 235 aa21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 ELOVL4Q9GZR5 314 aa21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 PABPC3Q9H361 631 aaKnown RBP21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 FAM124BQ9H5Z6 455 aaPredicted RBP21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 DPP3Q9NY33 737 aa21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 WHRNQ9P202 907 aa21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 GNEQ9Y223 722 aaKnown RBP21.54■■□□□ 1.04
CHRNA3-202ENST00000348639 GJC1P36383 396 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 CCNG2Q16589 344 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 CCL14Q16627 93 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 DNAJC21Q5F1R6 531 aaKnown RBP21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 LRRC31Q6UY01 552 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 TLK2Q86UE8 772 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 ATL2Q8NHH9 583 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 RBM41Q96IZ5 413 aaKnown RBP21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 TWNKQ96RR1 684 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 EPB41L4BQ9H329 900 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 CYTH4Q9UIA0 394 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 R3HDM2Q9Y2K5 976 aaKnown RBP21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 NRCAMQ92823 1304 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 MANSC4A6NHS7 340 aaPredicted RBP21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 F8VP50 259 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 F2P00734 622 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 NR1D1P20393 614 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 CYP2B6P20813 491 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 HNRNPH2P55795 449 aaKnown RBP21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 GSCP56915 257 aaPredicted RBP21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 NFX1Q12986 1120 aaKnown RBP21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 CALCOCO2Q13137 446 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 PTK6Q13882 451 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 OLFML2BQ68BL8 750 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 GCOM2Q9BZD3 368 aaPredicted RBP21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 HMGXB4Q9UGU5 601 aa21.53■■□□□ 1.04
CHRNA3-202ENST00000348639 SIGLEC16A6NMB1 481 aa21.52■■□□□ 1.04
CHRNA3-202ENST00000348639 GPR32O75388 356 aa21.52■■□□□ 1.04
CHRNA3-202ENST00000348639 GAS8O95995 478 aa21.52■■□□□ 1.04
CHRNA3-202ENST00000348639 NUDT17P0C025 328 aa21.52■■□□□ 1.04
CHRNA3-202ENST00000348639 SMIM10L2AP0DMW4 78 aa21.52■■□□□ 1.04
CHRNA3-202ENST00000348639 SMIM10L2BP0DMW5 78 aa21.52■■□□□ 1.04
CHRNA3-202ENST00000348639 TCF4P15884 667 aa21.52■■□□□ 1.04
CHRNA3-202ENST00000348639 HOXA11P31270 313 aaPredicted RBP21.52■■□□□ 1.04
CHRNA3-202ENST00000348639 IRAK1P51617 712 aa21.52■■□□□ 1.04
CHRNA3-202ENST00000348639 APBB1IPQ7Z5R6 666 aaPredicted RBP21.52■■□□□ 1.04
CHRNA3-202ENST00000348639 PLEKHA5Q9HAU0 1116 aa21.52■■□□□ 1.04
CHRNA3-202ENST00000348639 ITIH2P19823 946 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 INCA1Q0VD86 236 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 ORC1Q13415 861 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 SLMAPQ14BN4 828 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 ATP13A4Q4VNC1 1196 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 AGBL2Q5U5Z8 902 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 ANKS1BQ7Z6G8 1248 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 TTC39CQ8N584 583 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 KAT2BQ92831 832 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 RNF25Q96BH1 459 aaPredicted RBP21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 KIF12Q96FN5 646 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 SLITRK1Q96PX8 696 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 WDR35Q9P2L0 1181 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 BARX2Q9UMQ3 279 aaPredicted RBP21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 SMIM35A0A1B0GVV1 85 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 MBLAC1A4D2B0 266 aaPredicted RBP21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 IVLP07476 585 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 VDRP11473 427 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 KRT3P12035 628 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 COPS2P61201 443 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 PCBP1Q15365 356 aaKnown RBP eCLIP21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 CENPHQ9H3R5 247 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 CALCOCO1Q9P1Z2 691 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 ASIC3Q9UHC3 531 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 DERAQ9Y315 318 aa21.51■■□□□ 1.03
CHRNA3-202ENST00000348639 MICAL2O94851 1124 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 NPTXRO95502 500 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 HMGCRP04035 888 aa21.5■■□□□ 1.03
CHRNA3-202ENST00000348639 KRT1P04264 644 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms