RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 ZSWIM1Q9BR11 485 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 CDT1Q9H211 546 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 CCDC134Q9H6E4 229 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 MIF4GDA9UHW6 222 aaKnown RBP22.55■■□□□ 1.2
PTPN18-202ENST00000347849 PYGMP11217 842 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 RARGP13631 454 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 CLNS1AP54105 237 aaKnown RBP22.55■■□□□ 1.2
PTPN18-202ENST00000347849 TMEM132AQ24JP5 1023 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 EXOC3L1Q86VI1 746 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 DYDC1Q8WWB3 177 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 CPB2Q96IY4 423 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 NSRP1Q9H0G5 558 aaKnown RBP22.55■■□□□ 1.2
PTPN18-202ENST00000347849 L3MBTL1Q9Y468 752 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 MTA2O94776 668 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 UBOX5O94941 541 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 ASS1P00966 412 aaKnown RBP22.55■■□□□ 1.2
PTPN18-202ENST00000347849 CXCL8P10145 99 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 RRM1P23921 792 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 TFDP1Q14186 410 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 SLMAPQ14BN4 828 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 LLGL1Q15334 1064 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 TAOK1Q7L7X3 1001 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 CROCCP2Q86T23 111 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 EXOC8Q8IYI6 725 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 RBBP8NLQ8NC74 664 aaPredicted RBP22.55■■□□□ 1.2
PTPN18-202ENST00000347849 STAMBPL1Q96FJ0 436 aa22.55■■□□□ 1.2
PTPN18-202ENST00000347849 H3BRB1 525 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 SNX3O60493 162 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 HSPA6P17066 643 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 CD58P19256 250 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 PEX5P50542 639 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 AMHR2Q16671 573 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 LONRF1Q17RB8 773 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 ZNF484Q5JVG2 852 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 SEL1L2Q5TEA6 688 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 MCOLN2Q8IZK6 566 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 TINF2Q9BSI4 451 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 TMEM109Q9BVC6 243 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 STMN4Q9H169 189 aaPredicted RBP22.54■■□□□ 1.2
PTPN18-202ENST00000347849 TUT1Q9H6E5 874 aaKnown RBP22.54■■□□□ 1.2
PTPN18-202ENST00000347849 AKT3Q9Y243 479 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 FKBP1BP68106 108 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 ZNF394Q53GI3 561 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 MARCH8Q5T0T0 291 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 ZNF467Q7Z7K2 595 aaPredicted RBP22.54■■□□□ 1.2
PTPN18-202ENST00000347849 CD101Q93033 1021 aa22.54■■□□□ 1.2
PTPN18-202ENST00000347849 CYP1A1P04798 512 aaPredicted RBP22.53■■□□□ 1.2
PTPN18-202ENST00000347849 GNA15P30679 374 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 GBP1P32455 592 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 KCNJ2P63252 427 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 ACVR2BQ13705 512 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 TNFAIP8L3Q5GJ75 292 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 DAB2IPQ5VWQ8 1189 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 PLEKHH3Q7Z736 793 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 ART4Q93070 314 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 EMID1Q96A84 441 aaPredicted RBP22.53■■□□□ 1.2
PTPN18-202ENST00000347849 LENG1Q96BZ8 264 aaPredicted RBP22.53■■□□□ 1.2
PTPN18-202ENST00000347849 PARK7Q99497 189 aaKnown RBP22.53■■□□□ 1.2
PTPN18-202ENST00000347849 CFAP73A6NFT4 308 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 WEE2P0C1S8 567 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 CREB1P16220 341 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 COILP38432 576 aaPredicted RBP22.53■■□□□ 1.2
PTPN18-202ENST00000347849 DUOXA2Q1HG44 320 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 FAM110CQ1W6H9 321 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 UBR7Q8N806 425 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 MLXIPLQ9NP71 852 aa22.53■■□□□ 1.2
PTPN18-202ENST00000347849 TCP11X1B4DZS4 312 aa22.52■■□□□ 1.2
PTPN18-202ENST00000347849 MTHFD1LQ6UB35 978 aa22.52■■□□□ 1.2
PTPN18-202ENST00000347849 SCARA5Q6ZMJ2 495 aa22.52■■□□□ 1.2
PTPN18-202ENST00000347849 FAM81BQ96LP2 452 aa22.52■■□□□ 1.2
PTPN18-202ENST00000347849 DDX23Q9BUQ8 820 aaKnown RBP22.52■■□□□ 1.2
PTPN18-202ENST00000347849 FGFR1OP2Q9NVK5 253 aa22.52■■□□□ 1.2
PTPN18-202ENST00000347849 CNTN6Q9UQ52 1028 aa22.52■■□□□ 1.2
PTPN18-202ENST00000347849 TNFSF13BQ9Y275 285 aa22.52■■□□□ 1.2
PTPN18-202ENST00000347849 MROH7Q68CQ1 1323 aa22.52■■□□□ 1.2
PTPN18-202ENST00000347849 MMP3P08254 477 aa22.52■■□□□ 1.2
PTPN18-202ENST00000347849 RARAP10276 462 aa22.52■■□□□ 1.2
PTPN18-202ENST00000347849 MYO1EQ12965 1108 aa22.52■■□□□ 1.2
PTPN18-202ENST00000347849 DUSP28Q4G0W2 176 aa22.52■■□□□ 1.2
PTPN18-202ENST00000347849 THOC1Q96FV9 657 aaKnown RBP22.52■■□□□ 1.2
PTPN18-202ENST00000347849 XYLT2Q9H1B5 865 aa22.52■■□□□ 1.2
PTPN18-202ENST00000347849 HOMER3Q9NSC5 361 aa22.52■■□□□ 1.2
PTPN18-202ENST00000347849 USP15Q9Y4E8 981 aaPredicted RBP22.52■■□□□ 1.2
PTPN18-202ENST00000347849 FOXO6A8MYZ6 492 aa22.51■■□□□ 1.19
PTPN18-202ENST00000347849 IGF2BP3O00425 579 aaKnown RBP eCLIP22.51■■□□□ 1.19
PTPN18-202ENST00000347849 GJB6O95452 261 aa22.51■■□□□ 1.19
PTPN18-202ENST00000347849 ACSL3O95573 720 aa22.51■■□□□ 1.19
PTPN18-202ENST00000347849 PSEN1P49768 467 aa22.51■■□□□ 1.19
PTPN18-202ENST00000347849 RIPK1Q13546 671 aa22.51■■□□□ 1.19
PTPN18-202ENST00000347849 NSMCE1Q8WV22 266 aa22.51■■□□□ 1.19
PTPN18-202ENST00000347849 ARHGEF2Q92974 986 aaKnown RBP22.51■■□□□ 1.19
PTPN18-202ENST00000347849 C11orf70Q9BRQ4 267 aa22.51■■□□□ 1.19
PTPN18-202ENST00000347849 THAP12O43422 761 aa22.51■■□□□ 1.19
PTPN18-202ENST00000347849 NFICP08651 508 aa22.51■■□□□ 1.19
PTPN18-202ENST00000347849 NQO1P15559 274 aaKnown RBP22.51■■□□□ 1.19
PTPN18-202ENST00000347849 NOMO3P69849 1222 aa22.51■■□□□ 1.19
PTPN18-202ENST00000347849 CENPCQ03188 943 aa22.51■■□□□ 1.19
PTPN18-202ENST00000347849 GRM1Q13255 1194 aa22.51■■□□□ 1.19
PTPN18-202ENST00000347849 NAA25Q14CX7 972 aa22.51■■□□□ 1.19
PTPN18-202ENST00000347849 MON1BQ7L1V2 547 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms