RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 CCDC3Q9BQI4 270 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 C20orf96Q9NUD7 363 aaPredicted RBP12.31□□□□□ -0.44
TRAF3-201ENST00000347662 CHURC1-FNTBB4DL54 471 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 C2CD2LO14523 706 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 STRNO43815 780 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 ZNF24P17028 368 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 RGS2P41220 211 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 FAM102AQ5T9C2 384 aaPredicted RBP12.31□□□□□ -0.44
TRAF3-201ENST00000347662 ZNF512Q96ME7 567 aaPredicted RBP12.31□□□□□ -0.44
TRAF3-201ENST00000347662 KLHL11Q9NVR0 708 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 ARL3P36405 182 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 STX3Q13277 289 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 C12orf60Q5U649 245 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 AVENQ9NQS1 362 aaPredicted RBP12.31□□□□□ -0.44
TRAF3-201ENST00000347662 BFARQ9NZS9 450 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 NRBP1Q9UHY1 535 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 PIN4Q9Y237 131 aaKnown RBP12.31□□□□□ -0.44
TRAF3-201ENST00000347662 ZNF521Q96K83 1311 aa12.31□□□□□ -0.44
TRAF3-201ENST00000347662 GCLMP48507 274 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 ZNF445P59923 1031 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 CDK17Q00537 523 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 ZNF618Q5T7W0 954 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 SFR1Q86XK3 245 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 SYTL1Q8IYJ3 562 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 SPIRE2Q8WWL2 714 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 INTS13Q9NVM9 706 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 PIK3C2BO00750 1634 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 DDX39BQ13838 428 aaKnown RBP12.3□□□□□ -0.44
TRAF3-201ENST00000347662 GNASQ5JWF2 1037 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 STYK1Q6J9G0 422 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 ZNF544Q6NX49 715 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 SLC25A41Q8N5S1 370 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 XPO6Q96QU8 1125 aaKnown RBP12.3□□□□□ -0.44
TRAF3-201ENST00000347662 ARHGEF38Q9NXL2 777 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 CDC27P30260 824 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 STX4Q12846 297 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 NCF4Q15080 339 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 ZSWIM7Q19AV6 140 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 SLC4A9Q96Q91 983 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 RRAGCQ9HB90 399 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 JPH1Q9HDC5 661 aaPredicted RBP12.3□□□□□ -0.44
TRAF3-201ENST00000347662 SOWAHDA6NJG2 315 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 SNPHO15079 494 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 CLASP2O75122 1294 aaKnown RBP12.3□□□□□ -0.44
TRAF3-201ENST00000347662 GGPS1O95749 300 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 CALB1P05937 261 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 ATG9AQ7Z3C6 839 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 RNF149Q8NC42 400 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 TNIP2Q8NFZ5 429 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 FAM45AQ8TCE6 357 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 EME1Q96AY2 570 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 PAGE5Q96GU1 130 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 PHACTR1Q9C0D0 580 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 POLR3FQ9H1D9 316 aaPredicted RBP12.3□□□□□ -0.44
TRAF3-201ENST00000347662 RSPH9Q9H1X1 276 aaPredicted RBP12.3□□□□□ -0.44
TRAF3-201ENST00000347662 PRR12Q9ULL5 1215 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 SNX24Q9Y343 169 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 TRADDQ15628 312 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 PHACTR4Q8IZ21 702 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 A0A1W2PQ27 194 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 A0A1W2PQ64 194 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 A0A1W2PQD8 194 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 GOLGA8TH3BQL2 631 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 KCNN4O15554 427 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 NOS3P29474 1203 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 ETFBP38117 255 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 KRT74Q7RTS7 529 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 ANKRD13AQ8IZ07 590 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 TMEM35BQ8NCS4 154 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 STKLD1Q8NE28 680 aa12.3□□□□□ -0.44
TRAF3-201ENST00000347662 KRT33AO76009 404 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 GNA15P30679 374 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 RRM2P31350 389 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 SESN2P58004 480 aaPredicted RBP12.29□□□□□ -0.44
TRAF3-201ENST00000347662 TRIM65Q6PJ69 517 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 OTOAQ7RTW8 1153 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 VPS37AQ8NEZ2 397 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 DTX3LQ8TDB6 740 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 PABPC5Q96DU9 382 aaKnown RBP12.29□□□□□ -0.44
TRAF3-201ENST00000347662 AHCYL2Q96HN2 611 aaKnown RBP12.29□□□□□ -0.44
TRAF3-201ENST00000347662 PIGUQ9H490 435 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 SLC9A2Q9UBY0 812 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 XPO1O14980 1071 aaKnown RBP12.29□□□□□ -0.44
TRAF3-201ENST00000347662 TSPAN9O75954 239 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 EPHX2P34913 555 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 CCNIQ14094 377 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 PPP4R3CPQ6ZMV5 832 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 NEDD1Q8NHV4 660 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 OMA1Q96E52 524 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 PRKD2Q9BZL6 878 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 SERHL2Q9H4I8 314 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 SERHLQ9NQF3 203 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 UVRAGQ9P2Y5 699 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 SEPT3Q9UH03 358 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 SMIM31A0A1B0GVY4 71 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 PP2D1A8MPX8 630 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 STXBP3O00186 592 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 DNAJC1Q96KC8 554 aaKnown RBP12.29□□□□□ -0.44
TRAF3-201ENST00000347662 NUP85Q9BW27 656 aa12.29□□□□□ -0.44
TRAF3-201ENST00000347662 STAT5BP51692 787 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms