RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 DGAT1O75907 488 aa10.96□□□□□ -0.65
SMG7-201ENST00000347615 TXNP10599 105 aaKnown RBP10.96□□□□□ -0.65
SMG7-201ENST00000347615 CUL2Q13617 745 aa10.96□□□□□ -0.65
SMG7-201ENST00000347615 PDCD2Q16342 344 aaPredicted RBP10.96□□□□□ -0.65
SMG7-201ENST00000347615 PKN2Q16513 984 aaKnown RBP10.96□□□□□ -0.65
SMG7-201ENST00000347615 TKFCQ3LXA3 575 aa10.96□□□□□ -0.65
SMG7-201ENST00000347615 FIGNQ5HY92 759 aa10.96□□□□□ -0.65
SMG7-201ENST00000347615 PTPRHQ9HD43 1115 aa10.96□□□□□ -0.65
SMG7-201ENST00000347615 SALL4Q9UJQ4 1053 aa10.96□□□□□ -0.65
SMG7-201ENST00000347615 XPOTO43592 962 aaKnown RBP10.96□□□□□ -0.65
SMG7-201ENST00000347615 LGR5O75473 907 aa10.96□□□□□ -0.65
SMG7-201ENST00000347615 ATP13A4Q4VNC1 1196 aa10.96□□□□□ -0.65
SMG7-201ENST00000347615 SLC30A9Q6PML9 568 aa10.96□□□□□ -0.65
SMG7-201ENST00000347615 TRIM72Q6ZMU5 477 aa10.96□□□□□ -0.65
SMG7-201ENST00000347615 CPB2Q96IY4 423 aa10.96□□□□□ -0.65
SMG7-201ENST00000347615 PTENP60484 403 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 KCNJ2P63252 427 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 SEMA3FQ13275 785 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 DCAF6Q58WW2 860 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 CES3Q6UWW8 571 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 RNF148Q8N7C7 305 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 SLC35C1Q96A29 364 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 PAFAH2Q99487 392 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 ROPN1BQ9BZX4 212 aaPredicted RBP10.96□□□□□ -0.66
SMG7-201ENST00000347615 ROPN1Q9HAT0 212 aaPredicted RBP10.96□□□□□ -0.66
SMG7-201ENST00000347615 UBP1Q9NZI7 540 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 PACSIN3Q9UKS6 424 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 ZNF263O14978 683 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 FOXP2O15409 715 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 CTSHP09668 335 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 RARGP13631 454 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 ALDH5A1P51649 535 aaPredicted RBP10.96□□□□□ -0.66
SMG7-201ENST00000347615 MED21Q13503 144 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 CAPRIN1Q14444 709 aaKnown RBP10.96□□□□□ -0.66
SMG7-201ENST00000347615 GOLGA7BQ2TAP0 167 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 PPP1R2P3Q6NXS1 205 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 IRF2BP1Q8IU81 584 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 FBXL16Q8N461 479 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 AFG1LQ8WV93 481 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 SEMA4DQ92854 862 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 ZBTB45Q96K62 511 aaPredicted RBP10.96□□□□□ -0.66
SMG7-201ENST00000347615 TMEM120AQ9BXJ8 343 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 AP5M1Q9H0R1 490 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 GTF3C4Q9UKN8 822 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 AKAP10O43572 662 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 SLITRK3O94933 977 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 USP10Q14694 798 aaKnown RBP10.96□□□□□ -0.66
SMG7-201ENST00000347615 GPR162Q16538 588 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 EFHC2Q5JST6 749 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 ANO5Q75V66 913 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 PTF1AQ7RTS3 328 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 RTKN2Q8IZC4 609 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 EFCAB3Q8N7B9 438 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 POU5F2Q8N7G0 328 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 NETO2Q8NC67 525 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 ELMO2Q96JJ3 720 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 MYLK2Q9H1R3 596 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 BFARQ9NZS9 450 aa10.96□□□□□ -0.66
SMG7-201ENST00000347615 HNRNPCP07910 306 aaKnown RBP eCLIP10.95□□□□□ -0.664e-7■■□□□ 11.5
SMG7-201ENST00000347615 STRIP1Q5VSL9 837 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 CDKL3Q8IVW4 592 aaPredicted RBP10.95□□□□□ -0.66
SMG7-201ENST00000347615 MICALL2Q8IY33 904 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 RIOX1Q9H6W3 641 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 SLC39A10Q9ULF5 831 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 PIN4Q9Y237 131 aaKnown RBP10.95□□□□□ -0.66
SMG7-201ENST00000347615 SYNDIG1LA6NDD5 238 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 SMNDC1O75940 238 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMG7-201ENST00000347615 TAC1P20366 129 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 SHMT1P34896 483 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 SLC12A3P55017 1021 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 AQP5P55064 265 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 ITGB3BPQ13352 177 aaPredicted RBP10.95□□□□□ -0.66
SMG7-201ENST00000347615 RBBP7Q16576 425 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 SLC51AQ86UW1 340 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 ABI1Q8IZP0 508 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 TTC30BQ8N4P2 665 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 CYGBQ8WWM9 190 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.95□□□□□ -0.661e-6■■■■■ 45.8
SMG7-201ENST00000347615 MAGEB18Q96M61 343 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 MMP19Q99542 508 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 THEGQ9P2T0 379 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 HERC5Q9UII4 1024 aaKnown RBP10.95□□□□□ -0.66
SMG7-201ENST00000347615 A8MUI8 341 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 EXTL3O43909 919 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 CHKAP35790 457 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 PIGHQ14442 188 aaPredicted RBP10.95□□□□□ -0.66
SMG7-201ENST00000347615 SV2AQ7L0J3 742 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 PPIL6Q8IXY8 311 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 LNX1Q8TBB1 728 aaPredicted RBP10.95□□□□□ -0.66
SMG7-201ENST00000347615 ADNPQ9H2P0 1102 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 SPC25Q9HBM1 224 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 NWD1Q149M9 1564 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 E9PBE3 544 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 KLHL41O60662 606 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 AARSP49588 968 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMG7-201ENST00000347615 NUDT2P50583 147 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 PPP4CP60510 307 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 RNF217Q8TC41 542 aa10.95□□□□□ -0.66
SMG7-201ENST00000347615 DIS3LQ8TF46 1054 aaKnown RBP10.95□□□□□ -0.66
SMG7-201ENST00000347615 TEKT4Q8WW24 435 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms