RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 HERPUD2Q9BSE4 406 aa14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 LRRC19Q9H756 370 aa14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 PODXLO00592 558 aa14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 STAU1O95793 577 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 GJC1P36383 396 aa14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 FNTAP49354 379 aa14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 DRG2P55039 364 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 OGDHQ02218 1023 aa14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 FSCN1Q16658 493 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 SGO2Q562F6 1265 aa14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 C1orf54Q8WWF1 131 aa14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 SNX27Q96L92 541 aa14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 RUNDC3BQ96NL0 473 aa14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 TJP2Q9UDY2 1190 aa14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 STRIP2Q9ULQ0 834 aa14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 PTPN22Q9Y2R2 807 aa14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 SNX24Q9Y343 169 aa14.95□□□□□ -0.02
CDK5RAP1-202ENST00000346416 F8VP50 259 aa14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 KRT14P02533 472 aa14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 CTGFP29279 349 aa14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 HSD17B3P37058 310 aa14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 YARSP54577 528 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 TAP1Q03518 808 aa14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 INCA1Q0VD86 236 aa14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 MYO1EQ12965 1108 aa14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 SNX17Q15036 470 aa14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 MAIP1Q8WWC4 291 aa14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 HEXIM2Q96MH2 286 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 FMO2Q99518 471 aa14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 KATNAL1Q9BW62 490 aa14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 TRIM6Q9C030 488 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 NXF3Q9H4D5 531 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 BARX2Q9UMQ3 279 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 DERAQ9Y315 318 aa14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 SCN1AP35498 2009 aa14.94□□□□□ -0.02
CDK5RAP1-202ENST00000346416 FAM155AB1AL88 458 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 RALAP11233 206 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 TCF4P15884 667 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 NDST1P52848 882 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 TMC3Q7Z5M5 1100 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 EXD1Q8NHP7 514 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 CPXM1Q96SM3 734 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 HEMGNQ9BXL5 484 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 ZDHHC18Q9NUE0 388 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 LCMT1Q9UIC8 334 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 PIN4Q9Y237 131 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 C17orf102A2RUQ5 167 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 GOLGA6CA6NDK9 693 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 GOLGA8KD6RF30 607 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 GOLGA8SH3BPF8 625 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 MICAL2O94851 1124 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 GOLGA6DP0CG33 693 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 VDRP11473 427 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 AKR1A1P14550 325 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 AXLP30530 894 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 RPL21P46778 160 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 PLTPP55058 493 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 PURAQ00577 322 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 KLF1Q13351 362 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 SNX1Q13596 522 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 ZBTB6Q15916 424 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 UAP1Q16222 522 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 CNGA2Q16280 664 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 ATP13A4Q4VNC1 1196 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 GLRA4Q5JXX5 417 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 DPH6Q7L8W6 267 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 ATG4AQ8WYN0 398 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 SYNCQ9H7C4 482 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 CHST7Q9NS84 486 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 GOLGA6AQ9NYA3 693 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 TUBGCP4Q9UGJ1 667 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 PLAAQ9Y263 795 aa14.93□□□□□ -0.02
CDK5RAP1-202ENST00000346416 RALGAPA2Q2PPJ7 1873 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 M0QYV0 167 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 PPEF2O14830 753 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 RECQL4O94761 1208 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 ECEL1O95672 775 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 HMGCRP04035 888 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 KRT3P12035 628 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 AKAP5P24588 427 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 RFC1P35251 1148 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 PSMC1P62191 440 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 DHX9Q08211 1270 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 SREBF2Q12772 1141 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 PIGHQ14442 188 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 ZDHHC24Q6UX98 284 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 ALKAL1Q6UXT8 129 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 TTC39CQ8N584 583 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 C7orf31Q8N865 590 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 TRPV1Q8NER1 839 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 FBXO25Q8TCJ0 367 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 C18orf25Q96B23 403 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 ARL8AQ96BM9 186 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 APOL6Q9BWW8 343 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 OSBPL8Q9BZF1 889 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 FAM124BQ9H5Z6 455 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 RNF19AQ9NV58 838 aa14.92□□□□□ -0.02
CDK5RAP1-202ENST00000346416 KLHL11Q9NVR0 708 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms