RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ZNF571Q7Z3V5 609 aaPredicted RBP12.62□□□□□ -0.39
COL12A1-202ENST00000345356 LUZP2Q86TE4 346 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 P3H2Q8IVL5 708 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 MREGQ8N565 214 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 FAM71DQ8N9W8 422 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 SPATA18Q8TC71 538 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 CAPSLQ8WWF8 208 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 RRN3Q9NYV6 651 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 PAK5Q9P286 719 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 SLC24A2Q9UI40 661 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 PNPLA6Q8IY17 1366 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 ABLIM1O14639 778 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 LSM1O15116 133 aaKnown RBP12.62□□□□□ -0.39
COL12A1-202ENST00000345356 YY1P25490 414 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 SPRP35270 261 aaPredicted RBP12.62□□□□□ -0.39
COL12A1-202ENST00000345356 PDPK2PQ6A1A2 396 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 ITPRIPL1Q6GPH6 555 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 OR6B3Q8NGW1 331 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 ILKAPQ9H0C8 392 aaPredicted RBP12.62□□□□□ -0.39
COL12A1-202ENST00000345356 EURLQ9NYK6 297 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 HEG1Q9ULI3 1381 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 PNPLA7Q6ZV29 1317 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 XPOTO43592 962 aaKnown RBP12.62□□□□□ -0.39
COL12A1-202ENST00000345356 GSNP06396 782 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 EIF2AK2P19525 551 aaKnown RBP12.62□□□□□ -0.39
COL12A1-202ENST00000345356 NFX1Q12986 1120 aaKnown RBP12.62□□□□□ -0.39
COL12A1-202ENST00000345356 FAM47CQ5HY64 1035 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 HAUS6Q7Z4H7 955 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 LXNQ9BS40 222 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 NSMCE4AQ9NXX6 385 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 E9PBE3 544 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 ADCY6O43306 1168 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 KLHL41O60662 606 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 ST13P50502 369 aaKnown RBP12.61□□□□□ -0.39
COL12A1-202ENST00000345356 KCNQ4P56696 695 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 ACAP1Q15027 740 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 COBLL1Q53SF7 1204 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 SLC27A3Q5K4L6 730 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 RBM44Q6ZP01 1051 aaKnown RBP12.61□□□□□ -0.39
COL12A1-202ENST00000345356 GPD1LQ8N335 351 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 GTF3C4Q9UKN8 822 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 AKT3Q9Y243 479 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 A0A0A6YYK5 440 aaPredicted RBP12.61□□□□□ -0.39
COL12A1-202ENST00000345356 CES2O00748 559 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 RBP3P10745 1247 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 SARSP49591 514 aaKnown RBP12.61□□□□□ -0.39
COL12A1-202ENST00000345356 NCALDP61601 193 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 NEDD8Q15843 81 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 KBTBD12Q3ZCT8 623 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 TJAP1Q5JTD0 557 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 PDXDC2PQ6P474 469 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 CKAP2Q8WWK9 683 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 DPPA5A6NC42 116 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 PRDX5P30044 214 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 GJA8P48165 433 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 TRAF2Q12933 501 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 LAMC2Q13753 1193 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 PTK2BQ14289 1009 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 PIGHQ14442 188 aaPredicted RBP12.61□□□□□ -0.39
COL12A1-202ENST00000345356 RGS21Q2M5E4 152 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 RNF43Q68DV7 783 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 OR6Y1Q8NGX8 325 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 OR6P1Q8NGX9 317 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 USP13Q92995 863 aaPredicted RBP12.61□□□□□ -0.39
COL12A1-202ENST00000345356 SAC3D1A6NKF1 404 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 M0QZ92 97 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 FOXO4P98177 505 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 ZNF75CPQ92670 426 aaPredicted RBP12.61□□□□□ -0.39
COL12A1-202ENST00000345356 AGAP3Q96P47 875 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 SEMA6BQ9H3T3 888 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 PLGRKTQ9HBL7 147 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 IQSEC2Q5JU85 1478 aa12.61□□□□□ -0.39
COL12A1-202ENST00000345356 NBNO60934 754 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 SHBGP04278 402 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 NFKBIAP25963 317 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 MAPK10P53779 464 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 LBRQ14739 615 aaKnown RBP12.6□□□□□ -0.39
COL12A1-202ENST00000345356 PDK3Q15120 406 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.6□□□□□ -0.39
COL12A1-202ENST00000345356 MCPH1Q8NEM0 835 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 FAM162AQ96A26 154 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 TUBA8Q9NY65 449 aaPredicted RBP12.6□□□□□ -0.39
COL12A1-202ENST00000345356 COPG2Q9UBF2 871 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 CPSF3Q9UKF6 684 aaKnown RBP12.6□□□□□ -0.39
COL12A1-202ENST00000345356 FLT1P17948 1338 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 RPL5P46777 297 aaKnown RBP12.6□□□□□ -0.39
COL12A1-202ENST00000345356 CDK16Q00536 496 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 SPDYCQ5MJ68 293 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 NT5DC1Q5TFE4 455 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 EIF1ADQ8N9N8 165 aaKnown RBP12.6□□□□□ -0.39
COL12A1-202ENST00000345356 RIN3Q8TB24 985 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 SH3GLB1Q9Y371 365 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 GLRA3O75311 464 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 CCND2P30279 289 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 IL6STP40189 918 aaPredicted RBP12.6□□□□□ -0.39
COL12A1-202ENST00000345356 BLMHQ13867 455 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 ARMCX2Q7L311 632 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 POU5F2Q8N7G0 328 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 SESN1Q9Y6P5 492 aa12.6□□□□□ -0.39
COL12A1-202ENST00000345356 INO80Q9ULG1 1556 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms