RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 KXD1Q9BQD3 176 aa17.25■□□□□ 0.35
ATG4B-201ENST00000344376 GPR88Q9GZN0 384 aa17.25■□□□□ 0.35
ATG4B-201ENST00000344376 DNAJC25Q9H1X3 360 aa17.25■□□□□ 0.35
ATG4B-201ENST00000344376 KCTD10Q9H3F6 313 aa17.25■□□□□ 0.35
ATG4B-201ENST00000344376 PHACTR2O75167 634 aa17.24■□□□□ 0.35
ATG4B-201ENST00000344376 NR3C1P04150 777 aa17.24■□□□□ 0.35
ATG4B-201ENST00000344376 CCR2P41597 374 aa17.24■□□□□ 0.35
ATG4B-201ENST00000344376 NUBP1P53384 320 aa17.24■□□□□ 0.35
ATG4B-201ENST00000344376 AP3M2P53677 418 aa17.24■□□□□ 0.35
ATG4B-201ENST00000344376 VCPP55072 806 aaKnown RBP17.24■□□□□ 0.35
ATG4B-201ENST00000344376 INTS6LQ5JSJ4 861 aaKnown RBP17.24■□□□□ 0.35
ATG4B-201ENST00000344376 ASTLQ6HA08 431 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-201ENST00000344376 LRRTM3Q86VH5 581 aa17.24■□□□□ 0.35
ATG4B-201ENST00000344376 GPR152Q8TDT2 470 aa17.24■□□□□ 0.35
ATG4B-201ENST00000344376 PSMG2Q969U7 264 aa17.24■□□□□ 0.35
ATG4B-201ENST00000344376 SLITRK6Q9H5Y7 841 aa17.24■□□□□ 0.35
ATG4B-201ENST00000344376 DMAC2Q9NW81 257 aa17.24■□□□□ 0.35
ATG4B-201ENST00000344376 CA14Q9ULX7 337 aa17.24■□□□□ 0.35
ATG4B-201ENST00000344376 FRMD4BQ9Y2L6 1034 aa17.24■□□□□ 0.35
ATG4B-201ENST00000344376 SOAT2O75908 522 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 CLSTN1O94985 981 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 CLCN5P51795 746 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 TNNC1P63316 161 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 PFKPQ01813 784 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 BIRC3Q13489 604 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 SOWAHAQ2M3V2 549 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 DNAJB7Q7Z6W7 309 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-201ENST00000344376 ELSPBP1Q96BH3 223 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 GCNAQ96QF7 691 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 MMS19Q96T76 1030 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 RPP25Q9BUL9 199 aaKnown RBP17.23■□□□□ 0.35
ATG4B-201ENST00000344376 ZFP14Q9HCL3 533 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 ABCB6Q9NP58 842 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 ARHGEF3Q9NR81 526 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 RMND1Q9NWS8 449 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 HOOK1Q9UJC3 728 aaKnown RBP17.23■□□□□ 0.35
ATG4B-201ENST00000344376 TCHHQ07283 1943 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 STK25O00506 426 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 GABRDO14764 452 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 HAPLN1P10915 354 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-201ENST00000344376 ACAT1P24752 427 aaKnown RBP17.23■□□□□ 0.35
ATG4B-201ENST00000344376 ATICP31939 592 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 FAM160A1Q05DH4 1040 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 TEAD2Q15562 447 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 FAM78AQ5JUQ0 283 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 CEP135Q66GS9 1140 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 SCARA3Q6AZY7 606 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 TMC8Q8IU68 726 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 FMR1NBQ8N0W7 255 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-201ENST00000344376 GUF1Q8N442 669 aaKnown RBP17.23■□□□□ 0.35
ATG4B-201ENST00000344376 SHKBP1Q8TBC3 707 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 SMARCD2Q92925 531 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 SYAP1Q96A49 352 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-201ENST00000344376 TRAF3IP3Q9Y228 551 aa17.23■□□□□ 0.35
ATG4B-201ENST00000344376 A0A1W2PRU2 124 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 GJA1P17302 382 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 CDR1P51861 262 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 PTPN5P54829 565 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 GPC5P78333 572 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 ARHGAP15Q53QZ3 475 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 OSTM1Q86WC4 334 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 SPATA2LQ8IUW3 424 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-201ENST00000344376 PARD3BQ8TEW8 1205 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 SHDQ96IW2 340 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 ASB16Q96NS5 453 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 LPIN3Q9BQK8 851 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 PI4K2AQ9BTU6 479 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 LRRC3Q9BY71 257 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 SNX25Q9H3E2 840 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 TMLHEQ9NVH6 421 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 CIZ1Q9ULV3 898 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-201ENST00000344376 DOCK6Q96HP0 2047 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 NOTCH4Q99466 2003 aa17.22■□□□□ 0.35
ATG4B-201ENST00000344376 MOSPD3O75425 235 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 SMC2O95347 1197 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 STAU1O95793 577 aaKnown RBP17.21■□□□□ 0.35
ATG4B-201ENST00000344376 ATF6P18850 670 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 WARSP23381 471 aaKnown RBP17.21■□□□□ 0.35
ATG4B-201ENST00000344376 RPL13P26373 211 aaKnown RBP17.21■□□□□ 0.35
ATG4B-201ENST00000344376 GABRR2P28476 465 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 CDC25CP30307 473 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 CASP4P49662 377 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 RPL10AP62906 217 aaKnown RBP17.21■□□□□ 0.35
ATG4B-201ENST00000344376 MAPRE1Q15691 268 aaKnown RBP17.21■□□□□ 0.35
ATG4B-201ENST00000344376 WDR72Q3MJ13 1102 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 IER5LQ5T953 404 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 CWF19L1Q69YN2 538 aaKnown RBP17.21■□□□□ 0.35
ATG4B-201ENST00000344376 TANGO2Q6ICL3 276 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 C4orf50Q6ZRC1 276 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 LIMS2Q7Z4I7 341 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 ZSCAN18Q8TBC5 510 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-201ENST00000344376 E2F7Q96AV8 911 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 SYT15Q9BQS2 421 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 GZF1Q9H116 711 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-201ENST00000344376 ATXN3LQ9H3M9 355 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 GTF3C4Q9UKN8 822 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 CDH9Q9ULB4 789 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 MAPK8IP1Q9UQF2 711 aa17.21■□□□□ 0.35
ATG4B-201ENST00000344376 ZDBF2Q9HCK1 2354 aa17.21■□□□□ 0.34
ATG4B-201ENST00000344376 ZNF318Q5VUA4 2279 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms