RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ADAM17P78536 824 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 DNAJC24Q6P3W2 148 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 ERICH1Q86X53 443 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 NT5DC4Q86YG4 428 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 REM2Q8IYK8 340 aaPredicted RBP19.71■□□□□ 0.75
HOXA9-201ENST00000343483 ZDHHC14Q8IZN3 488 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 TMEM40Q8WWA1 233 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 MAGOHBQ96A72 148 aaKnown RBP19.71■□□□□ 0.75
HOXA9-201ENST00000343483 TRIM31Q9BZY9 425 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 DPH5Q9H2P9 285 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 FAM114A2Q9NRY5 505 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 PLAAQ9Y263 795 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 C17orf102A2RUQ5 167 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 SHOX2O60902 331 aaPredicted RBP19.71■□□□□ 0.75
HOXA9-201ENST00000343483 CILPO75339 1184 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 AKR1A1P14550 325 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 YARSP54577 528 aaKnown RBP19.71■□□□□ 0.75
HOXA9-201ENST00000343483 CAP1Q01518 475 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 CYP4A22Q5TCH4 519 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 C7orf31Q8N865 590 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 SLC4A11Q8NBS3 891 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 SEC14L1Q92503 715 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 MCEEQ96PE7 176 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 ELOVL4Q9GZR5 314 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 CYP3A43Q9HB55 503 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 PIN4Q9Y237 131 aaKnown RBP19.71■□□□□ 0.75
HOXA9-201ENST00000343483 C6orf222P0C671 652 aaPredicted RBP19.7■□□□□ 0.74
HOXA9-201ENST00000343483 CHRNA3P32297 505 aa19.7■□□□□ 0.74
HOXA9-201ENST00000343483 CDH5P33151 784 aaPredicted RBP19.7■□□□□ 0.74
HOXA9-201ENST00000343483 GJC1P36383 396 aa19.7■□□□□ 0.74
HOXA9-201ENST00000343483 HSD17B3P37058 310 aa19.7■□□□□ 0.74
HOXA9-201ENST00000343483 SNX17Q15036 470 aa19.7■□□□□ 0.74
HOXA9-201ENST00000343483 KCTD16Q68DU8 428 aa19.7■□□□□ 0.74
HOXA9-201ENST00000343483 TMEM176AQ96HP8 235 aa19.7■□□□□ 0.74
HOXA9-201ENST00000343483 SNX27Q96L92 541 aa19.7■□□□□ 0.74
HOXA9-201ENST00000343483 APOL6Q9BWW8 343 aa19.7■□□□□ 0.74
HOXA9-201ENST00000343483 RAB17Q9H0T7 212 aa19.7■□□□□ 0.74
HOXA9-201ENST00000343483 NXF3Q9H4D5 531 aaKnown RBP19.7■□□□□ 0.74
HOXA9-201ENST00000343483 PLEKHA5Q9HAU0 1116 aa19.7■□□□□ 0.74
HOXA9-201ENST00000343483 O00370 1275 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 CA12O43570 354 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 IGHA2P01877 340 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 CTCFP49711 727 aaPredicted RBP19.69■□□□□ 0.74
HOXA9-201ENST00000343483 PURAQ00577 322 aaKnown RBP19.69■□□□□ 0.74
HOXA9-201ENST00000343483 PTPN11Q06124 597 aaPredicted RBP19.69■□□□□ 0.74
HOXA9-201ENST00000343483 DHX34Q14147 1143 aaKnown RBP19.69■□□□□ 0.74
HOXA9-201ENST00000343483 PCBP1Q15365 356 aaKnown RBP eCLIP19.69■□□□□ 0.74
HOXA9-201ENST00000343483 DNAJC21Q5F1R6 531 aaKnown RBP19.69■□□□□ 0.74
HOXA9-201ENST00000343483 DCUN1D2Q6PH85 259 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 SH2D3CQ8N5H7 860 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 DDX27Q96GQ7 796 aaKnown RBP19.69■□□□□ 0.74
HOXA9-201ENST00000343483 ZMAT2Q96NC0 199 aaKnown RBP19.69■□□□□ 0.74
HOXA9-201ENST00000343483 CAPS2Q9BXY5 557 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 ARHGAP39Q9C0H5 1083 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.69■□□□□ 0.74
HOXA9-201ENST00000343483 IP6K2Q9UHH9 426 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 MYADML2A6NDP7 307 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 TMEM191CA6NGB0 347 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 RARAP10276 462 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 TAS2R40P59535 323 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 MYO1EQ12965 1108 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 GLRA4Q5JXX5 417 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 SMYD5Q6GMV2 418 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 TTC27Q6P3X3 843 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 CCDC137Q6PK04 289 aaKnown RBP19.69■□□□□ 0.74
HOXA9-201ENST00000343483 DPH6Q7L8W6 267 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 JAMLQ86YT9 394 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 CCDC50Q8IVM0 306 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 RHOT1Q8IXI2 618 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 TRPV1Q8NER1 839 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 LHX5Q9H2C1 402 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 SAGE1Q9NXZ1 904 aa19.69■□□□□ 0.74
HOXA9-201ENST00000343483 PSTPIP1O43586 416 aa19.68■□□□□ 0.74
HOXA9-201ENST00000343483 FLT3P36888 993 aa19.68■□□□□ 0.74
HOXA9-201ENST00000343483 CEP85LQ5SZL2 805 aa19.68■□□□□ 0.74
HOXA9-201ENST00000343483 LRIG3Q6UXM1 1119 aa19.68■□□□□ 0.74
HOXA9-201ENST00000343483 ZNF296Q8WUU4 475 aaPredicted RBP19.68■□□□□ 0.74
HOXA9-201ENST00000343483 HEXIM2Q96MH2 286 aaKnown RBP19.68■□□□□ 0.74
HOXA9-201ENST00000343483 RNF19AQ9NV58 838 aa19.68■□□□□ 0.74
HOXA9-201ENST00000343483 TUBGCP4Q9UGJ1 667 aa19.68■□□□□ 0.74
HOXA9-201ENST00000343483 CYTH4Q9UIA0 394 aa19.68■□□□□ 0.74
HOXA9-201ENST00000343483 RASAL2Q9UJF2 1139 aa19.68■□□□□ 0.74
HOXA9-201ENST00000343483 FAM187AA6NFU0 413 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 RECQL4O94761 1208 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 GNAT1P11488 350 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 AKAP5P24588 427 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 PSMC4P43686 418 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 UAP1Q16222 522 aaPredicted RBP19.67■□□□□ 0.74
HOXA9-201ENST00000343483 PTPN20Q4JDL3 420 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 COL13A1Q5TAT6 717 aaPredicted RBP19.67■□□□□ 0.74
HOXA9-201ENST00000343483 C18orf25Q96B23 403 aaPredicted RBP19.67■□□□□ 0.74
HOXA9-201ENST00000343483 ERP44Q9BS26 406 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 SYNCQ9H7C4 482 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 STRIP2Q9ULQ0 834 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 DERAQ9Y315 318 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 TCRBV5S1A1TA0A578 114 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 GOLGA8SH3BPF8 625 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 DUSP11O75319 330 aaKnown RBP19.67■□□□□ 0.74
HOXA9-201ENST00000343483 ALDH1A1P00352 501 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 MAN1A1P33908 653 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms