RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 GRM2Q14416 872 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 KYAT3Q6YP21 454 aaKnown RBP10.17□□□□□ -0.78
HOXA1-201ENST00000343060 ZBED8Q8IZ13 594 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 ATP11CQ8NB49 1132 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 GMCL1P1Q8NEA9 526 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.17□□□□□ -0.78
HOXA1-201ENST00000343060 NKD2Q969F2 451 aaPredicted RBP10.17□□□□□ -0.78
HOXA1-201ENST00000343060 PAFAH2Q99487 392 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 LXNQ9BS40 222 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 UNC45AQ9H3U1 944 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 OCEL1Q9H607 264 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 KCNQ5Q9NR82 932 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 GGA1Q9UJY5 639 aa10.17□□□□□ -0.78
HOXA1-201ENST00000343060 GAS7O60861 476 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 TM7SF2O76062 418 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 ZSCAN5DPP0CG00 497 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 HOXA13P31271 388 aaPredicted RBP10.16□□□□□ -0.78
HOXA1-201ENST00000343060 PHBP35232 272 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 ARL4CP56559 192 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 RPL26P61254 145 aaKnown RBP10.16□□□□□ -0.78
HOXA1-201ENST00000343060 ZBTB16Q05516 673 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 NFX1Q12986 1120 aaKnown RBP10.16□□□□□ -0.78
HOXA1-201ENST00000343060 PDIA2Q13087 525 aaKnown RBP10.16□□□□□ -0.78
HOXA1-201ENST00000343060 GPS1Q13098 491 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 EFTUD2Q15029 972 aaKnown RBP eCLIP10.16□□□□□ -0.78
HOXA1-201ENST00000343060 USH1GQ495M9 461 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 PADI6Q6TGC4 694 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 SLC30A10Q6XR72 485 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 TTC7BQ86TV6 843 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 LCA5Q86VQ0 697 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 LRRC6Q86X45 466 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 SIAH1Q8IUQ4 282 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 TMC2Q8TDI7 906 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 DHX38Q92620 1227 aaKnown RBP10.16□□□□□ -0.78
HOXA1-201ENST00000343060 PANX3Q96QZ0 392 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 FNBP1Q96RU3 617 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 NMUR2Q9GZQ4 415 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 MIS12Q9H081 205 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 NDE1Q9NXR1 346 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 ADAMTSL1Q8N6G6 1762 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 ATP9BO43861 1147 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 RNASEH1O60930 286 aaKnown RBP10.16□□□□□ -0.78
HOXA1-201ENST00000343060 ZC3H11AO75152 810 aaKnown RBP eCLIP10.16□□□□□ -0.78
HOXA1-201ENST00000343060 FAM155BO75949 473 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 ATP5BP06576 529 aaKnown RBP10.16□□□□□ -0.78
HOXA1-201ENST00000343060 PYGBP11216 843 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 RANBP1P43487 201 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 VCPP55072 806 aaKnown RBP10.16□□□□□ -0.78
HOXA1-201ENST00000343060 AP2B1P63010 937 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 MAP3K10Q02779 954 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 SLC18A2Q05940 514 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 DNAL1Q4LDG9 190 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 RASIP1Q5U651 963 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 PLEKHA7Q6IQ23 1121 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 RIPOR1Q6ZS17 1223 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 SH2D5Q6ZV89 423 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 NLRX1Q86UT6 975 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 ST13P4Q8IZP2 240 aaPredicted RBP10.16□□□□□ -0.78
HOXA1-201ENST00000343060 FBXL13Q8NEE6 735 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.16□□□□□ -0.78
HOXA1-201ENST00000343060 FAM161BQ96MY7 647 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 SLITRK1Q96PX8 696 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 WDR83Q9BRX9 315 aaKnown RBP10.16□□□□□ -0.78
HOXA1-201ENST00000343060 KCNK4Q9NYG8 393 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 STRIP2Q9ULQ0 834 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 PPME1Q9Y570 386 aa10.16□□□□□ -0.78
HOXA1-201ENST00000343060 WDR91A4D1P6 747 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 ITGAVP06756 1048 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 ZCCHC18P0CG32 403 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 CD58P19256 250 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 SNAP25P60880 206 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 SEPT7Q16181 437 aaKnown RBP10.15□□□□□ -0.78
HOXA1-201ENST00000343060 SNRNP35Q16560 246 aaKnown RBP10.15□□□□□ -0.78
HOXA1-201ENST00000343060 HIF1AQ16665 826 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 CIAPIN1Q6FI81 312 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 AAGABQ6PD74 315 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 SMIM5Q71RC9 77 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 CBWD2Q8IUF1 395 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 SCUBE1Q8IWY4 988 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 RCOR2Q8IZ40 523 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 TAS1R2Q8TE23 839 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 APOPT1Q96IL0 206 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 VCPIP1Q96JH7 1222 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 DDX50Q9BQ39 737 aaKnown RBP10.15□□□□□ -0.78
HOXA1-201ENST00000343060 RAB20Q9NX57 234 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 CHCHD3Q9NX63 227 aaKnown RBP10.15□□□□□ -0.78
HOXA1-201ENST00000343060 SNCAIPQ9Y6H5 919 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 FKBP6O75344 327 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 CSDE1O75534 798 aaKnown RBP10.15□□□□□ -0.78
HOXA1-201ENST00000343060 CIB2O75838 187 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 MYL2P10916 166 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 IMPDH2P12268 514 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 ETS1P14921 441 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 TAL1P17542 331 aaPredicted RBP10.15□□□□□ -0.78
HOXA1-201ENST00000343060 NSFP46459 744 aaKnown RBP10.15□□□□□ -0.78
HOXA1-201ENST00000343060 NCKAP1LP55160 1127 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 XIAPP98170 497 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 TFDP1Q14186 410 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 TBCCQ15814 346 aa10.15□□□□□ -0.78
HOXA1-201ENST00000343060 LIN9Q5TKA1 542 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms