RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 VTNP04004 478 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 RBP3P10745 1247 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 GYS2P54840 703 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 HPCAP84074 193 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 FMR1Q06787 632 aaKnown RBP eCLIP15.66■□□□□ 0.1
UBE3B-202ENST00000342494 EIF2B5Q13144 721 aaKnown RBP15.66■□□□□ 0.1
UBE3B-202ENST00000342494 SENP2Q9HC62 589 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 NOP53Q9NZM5 478 aaKnown RBP15.66■□□□□ 0.1
UBE3B-202ENST00000342494 STOML1Q9UBI4 398 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 CROCC2H7BZ55 1655 aa15.66■□□□□ 0.1
UBE3B-202ENST00000342494 A0A1B0GTH6 734 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 CYB561D2O14569 222 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 MZF1P28698 734 aaPredicted RBP15.65■□□□□ 0.1
UBE3B-202ENST00000342494 HSPA9P38646 679 aaKnown RBP15.65■□□□□ 0.1
UBE3B-202ENST00000342494 AARS2Q5JTZ9 985 aaKnown RBP15.65■□□□□ 0.1
UBE3B-202ENST00000342494 NBPF12Q5TAG4 269 aaPredicted RBP15.65■□□□□ 0.1
UBE3B-202ENST00000342494 INTS5Q6P9B9 1019 aaKnown RBP15.65■□□□□ 0.1
UBE3B-202ENST00000342494 C1orf131Q8NDD1 294 aaKnown RBP15.65■□□□□ 0.1
UBE3B-202ENST00000342494 CHP1Q99653 195 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 RRAGCQ9HB90 399 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 DPP7Q9UHL4 492 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 ATMINO43313 823 aaPredicted RBP15.65■□□□□ 0.1
UBE3B-202ENST00000342494 MYL2P10916 166 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 KLRC1P26715 233 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 HIST2H2ACQ16777 129 aaPredicted RBP15.65■□□□□ 0.1
UBE3B-202ENST00000342494 HIST2H2AA3Q6FI13 130 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 GRAMD1AQ96CP6 724 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 BRD8Q9H0E9 1235 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 AGPAT5Q9NUQ2 364 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 PCDHB12Q9Y5F1 795 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 KPNA6O60684 536 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 CSE1LP55060 971 aaKnown RBP15.65■□□□□ 0.1
UBE3B-202ENST00000342494 POLE2P56282 527 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 CXCL9Q07325 125 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 CUL2Q13617 745 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 NBPF9Q3BBW0 867 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 MPZL3Q6UWV2 235 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 C11orf96Q7Z7L8 435 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 TRIM51Q9BSJ1 452 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 PCMTD2Q9NV79 361 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 MED14O60244 1454 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 ANXA9O76027 345 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 VCAM1P19320 739 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 COMTP21964 271 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 AVPR1AP37288 418 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 NAMPTP43490 491 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 BOLA3Q53S33 107 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 NUP93Q8N1F7 819 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 C9orf72Q96LT7 481 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 SMG5Q9UPR3 1016 aaKnown RBP15.65■□□□□ 0.1
UBE3B-202ENST00000342494 CAPZA2P47755 286 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 ALDH18A1P54886 795 aaKnown RBP15.65■□□□□ 0.1
UBE3B-202ENST00000342494 MAP1SQ66K74 1059 aaPredicted RBP15.65■□□□□ 0.1
UBE3B-202ENST00000342494 DPF2Q92785 391 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 FAM118BQ9BPY3 351 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 ETNK1Q9HBU6 452 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 CHST12Q9NRB3 414 aa15.65■□□□□ 0.1
UBE3B-202ENST00000342494 PTPRUQ92729 1446 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 ADGRA2Q96PE1 1338 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 PMPCBO75439 489 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 THP07101 528 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 EPHB3P54753 998 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 STX3Q13277 289 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 TTLL9Q3SXZ7 439 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 SGO1Q5FBB7 561 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 AGPAT3Q9NRZ7 376 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.64■□□□□ 0.09
UBE3B-202ENST00000342494 CLASP2O75122 1294 aaKnown RBP15.64■□□□□ 0.09
UBE3B-202ENST00000342494 DDNO94850 711 aaPredicted RBP15.64■□□□□ 0.09
UBE3B-202ENST00000342494 RAG1P15918 1043 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 MAP3K10Q02779 954 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 ANO5Q75V66 913 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 MS4A14Q96JA4 679 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 VPS9D1Q9Y2B5 631 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 DAB2P98082 770 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 LINC00523Q86TU6 105 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 PSMC3IPQ9P2W1 217 aaPredicted RBP15.64■□□□□ 0.09
UBE3B-202ENST00000342494 DSEQ9UL01 958 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 KRT87PA6NCN2 255 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 MAP3K13O43283 966 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 NPM3O75607 178 aaKnown RBP15.64■□□□□ 0.09
UBE3B-202ENST00000342494 ACOT1Q86TX2 421 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 CARNMT1Q8N4J0 409 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 GOLPH3Q9H4A6 298 aa15.64■□□□□ 0.09
UBE3B-202ENST00000342494 FAM47DPA6NHR8 397 aa15.63■□□□□ 0.09
UBE3B-202ENST00000342494 TMEM253P0C7T8 217 aa15.63■□□□□ 0.09
UBE3B-202ENST00000342494 INPP5AQ14642 412 aa15.63■□□□□ 0.09
UBE3B-202ENST00000342494 ZNF280DQ6N043 979 aa15.63■□□□□ 0.09
UBE3B-202ENST00000342494 C4orf22Q6V702 233 aa15.63■□□□□ 0.09
UBE3B-202ENST00000342494 USP49Q70CQ1 688 aa15.63■□□□□ 0.09
UBE3B-202ENST00000342494 ADGRF2Q8IZF7 708 aa15.63■□□□□ 0.09
UBE3B-202ENST00000342494 ZNF669Q96BR6 464 aaPredicted RBP15.63■□□□□ 0.09
UBE3B-202ENST00000342494 GPRC5CQ9NQ84 441 aa15.63■□□□□ 0.09
UBE3B-202ENST00000342494 C2orf81A6NN90 581 aa15.63■□□□□ 0.09
UBE3B-202ENST00000342494 PDHXO00330 501 aa15.63■□□□□ 0.09
UBE3B-202ENST00000342494 NKRFO15226 690 aaKnown RBP eCLIP15.63■□□□□ 0.09
UBE3B-202ENST00000342494 SPAG6O75602 509 aa15.63■□□□□ 0.09
UBE3B-202ENST00000342494 ZNF513Q8N8E2 541 aaPredicted RBP15.63■□□□□ 0.09
UBE3B-202ENST00000342494 DDI1Q8WTU0 396 aa15.63■□□□□ 0.09
UBE3B-202ENST00000342494 TFB1MQ8WVM0 346 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms