RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 TRMT61BQ9BVS5 477 aaKnown RBP21.68■■□□□ 1.06
SYNE2-201ENST00000341472 SLITRK6Q9H5Y7 841 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 CGNQ9P2M7 1197 aaKnown RBP21.68■■□□□ 1.06
SYNE2-201ENST00000341472 L1RE1Q9UN81 338 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 PCDHB5Q9Y5E4 795 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 ACTN4O43707 911 aaKnown RBP21.67■■□□□ 1.06
SYNE2-201ENST00000341472 HAPLN1P10915 354 aaPredicted RBP21.67■■□□□ 1.06
SYNE2-201ENST00000341472 PFKFB1P16118 471 aa21.67■■□□□ 1.06
SYNE2-201ENST00000341472 FCARP24071 287 aa21.67■■□□□ 1.06
SYNE2-201ENST00000341472 MYL7Q01449 175 aa21.67■■□□□ 1.06
SYNE2-201ENST00000341472 SNRNP35Q16560 246 aaKnown RBP21.67■■□□□ 1.06
SYNE2-201ENST00000341472 NFE2Q16621 373 aaPredicted RBP21.67■■□□□ 1.06
SYNE2-201ENST00000341472 KNOP1Q1ED39 458 aaKnown RBP21.67■■□□□ 1.06
SYNE2-201ENST00000341472 BMT2Q1RMZ1 405 aa21.67■■□□□ 1.06
SYNE2-201ENST00000341472 TOP6BLQ8N6T0 577 aa21.67■■□□□ 1.06
SYNE2-201ENST00000341472 HPDLQ96IR7 371 aa21.67■■□□□ 1.06
SYNE2-201ENST00000341472 CHAMP1Q96JM3 812 aa21.67■■□□□ 1.06
SYNE2-201ENST00000341472 FNBP1Q96RU3 617 aa21.67■■□□□ 1.06
SYNE2-201ENST00000341472 ATXN3LQ9H3M9 355 aa21.67■■□□□ 1.06
SYNE2-201ENST00000341472 TRPV4Q9HBA0 871 aa21.67■■□□□ 1.06
SYNE2-201ENST00000341472 DDX43Q9NXZ2 648 aaKnown RBP21.67■■□□□ 1.06
SYNE2-201ENST00000341472 ABI2Q9NYB9 513 aaPredicted RBP21.67■■□□□ 1.06
SYNE2-201ENST00000341472 KANSL1LA0AUZ9 987 aa21.66■■□□□ 1.06
SYNE2-201ENST00000341472 DCNP07585 359 aaKnown RBP21.66■■□□□ 1.06
SYNE2-201ENST00000341472 VIPR2P41587 438 aa21.66■■□□□ 1.06
SYNE2-201ENST00000341472 LHX1P48742 406 aa21.66■■□□□ 1.06
SYNE2-201ENST00000341472 PSMD2Q13200 908 aa21.66■■□□□ 1.06
SYNE2-201ENST00000341472 DPH6Q7L8W6 267 aa21.66■■□□□ 1.06
SYNE2-201ENST00000341472 WDR49Q8IV35 697 aa21.66■■□□□ 1.06
SYNE2-201ENST00000341472 GOLGA5Q8TBA6 731 aa21.66■■□□□ 1.06
SYNE2-201ENST00000341472 SPATA18Q8TC71 538 aa21.66■■□□□ 1.06
SYNE2-201ENST00000341472 GIPC2Q8TF65 315 aa21.66■■□□□ 1.06
SYNE2-201ENST00000341472 E2F7Q96AV8 911 aa21.66■■□□□ 1.06
SYNE2-201ENST00000341472 CCDC127Q96BQ5 260 aa21.66■■□□□ 1.06
SYNE2-201ENST00000341472 LPIN3Q9BQK8 851 aa21.66■■□□□ 1.06
SYNE2-201ENST00000341472 FOXQ1Q9C009 403 aa21.66■■□□□ 1.06
SYNE2-201ENST00000341472 BRD9Q9H8M2 597 aa21.66■■□□□ 1.06
SYNE2-201ENST00000341472 ZNF334Q9HCZ1 680 aaPredicted RBP21.66■■□□□ 1.06
SYNE2-201ENST00000341472 PTPRJQ12913 1337 aa21.65■■□□□ 1.06
SYNE2-201ENST00000341472 KLRC4O43908 158 aa21.65■■□□□ 1.06
SYNE2-201ENST00000341472 PRPF40AO75400 957 aaKnown RBP21.65■■□□□ 1.06
SYNE2-201ENST00000341472 DLATP10515 647 aaKnown RBP21.65■■□□□ 1.06
SYNE2-201ENST00000341472 PSMC3P17980 439 aa21.65■■□□□ 1.06
SYNE2-201ENST00000341472 TNNI1P19237 187 aa21.65■■□□□ 1.06
SYNE2-201ENST00000341472 GABRR2P28476 465 aa21.65■■□□□ 1.06
SYNE2-201ENST00000341472 GRM2Q14416 872 aa21.65■■□□□ 1.06
SYNE2-201ENST00000341472 PSMD6Q15008 389 aa21.65■■□□□ 1.06
SYNE2-201ENST00000341472 GAREM2Q75VX8 874 aa21.65■■□□□ 1.06
SYNE2-201ENST00000341472 TRAPPC11Q7Z392 1133 aa21.65■■□□□ 1.06
SYNE2-201ENST00000341472 C12orf56Q8IXR9 622 aa21.65■■□□□ 1.06
SYNE2-201ENST00000341472 NELL2Q99435 816 aa21.65■■□□□ 1.06
SYNE2-201ENST00000341472 DDX23Q9BUQ8 820 aaKnown RBP21.65■■□□□ 1.06
SYNE2-201ENST00000341472 SCAND2PQ9GZW5 306 aaPredicted RBP21.65■■□□□ 1.06
SYNE2-201ENST00000341472 EXOC1Q9NV70 894 aa21.65■■□□□ 1.06
SYNE2-201ENST00000341472 TMLHEQ9NVH6 421 aa21.65■■□□□ 1.06
SYNE2-201ENST00000341472 HPSEQ9Y251 543 aa21.65■■□□□ 1.06
SYNE2-201ENST00000341472 ZFHX2Q9C0A1 2572 aaPredicted RBP21.65■■□□□ 1.06
SYNE2-201ENST00000341472 FAM170BA6NMN3 283 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 EXOC3O60645 756 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 ACAT1P24752 427 aaKnown RBP21.64■■□□□ 1.05
SYNE2-201ENST00000341472 GDI1P31150 447 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 SYKP43405 635 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 CYP24A1Q07973 514 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 STK4Q13043 487 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 ANGPT1Q15389 498 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 SOWAHAQ2M3V2 549 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 KMT5BQ4FZB7 885 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 ARHGAP15Q53QZ3 475 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 MFSD6LQ8IWD5 586 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 ADGRF2Q8IZF7 708 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 PJA1Q8NG27 643 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 DEPDC1BQ8WUY9 529 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 DNASE1L2Q92874 299 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 IRF7Q92985 503 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 PI4K2AQ9BTU6 479 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 GTF3C4Q9UKN8 822 aa21.64■■□□□ 1.05
SYNE2-201ENST00000341472 NOTCH4Q99466 2003 aa21.63■■□□□ 1.05
SYNE2-201ENST00000341472 HEPACAM2A8MVW5 462 aa21.63■■□□□ 1.05
SYNE2-201ENST00000341472 GABRDO14764 452 aa21.63■■□□□ 1.05
SYNE2-201ENST00000341472 MYL1P05976 194 aa21.63■■□□□ 1.05
SYNE2-201ENST00000341472 ATF6P18850 670 aa21.63■■□□□ 1.05
SYNE2-201ENST00000341472 PCSK1P29120 753 aa21.63■■□□□ 1.05
SYNE2-201ENST00000341472 UBXN2BQ14CS0 331 aa21.63■■□□□ 1.05
SYNE2-201ENST00000341472 INTS6LQ5JSJ4 861 aaKnown RBP21.63■■□□□ 1.05
SYNE2-201ENST00000341472 GPR158Q5T848 1215 aa21.63■■□□□ 1.05
SYNE2-201ENST00000341472 VITQ6UXI7 678 aa21.63■■□□□ 1.05
SYNE2-201ENST00000341472 OSTM1Q86WC4 334 aa21.63■■□□□ 1.05
SYNE2-201ENST00000341472 ARID3BQ8IVW6 561 aaPredicted RBP21.63■■□□□ 1.05
SYNE2-201ENST00000341472 CGRRF1Q99675 332 aa21.63■■□□□ 1.05
SYNE2-201ENST00000341472 OSBPL6Q9BZF3 934 aa21.63■■□□□ 1.05
SYNE2-201ENST00000341472 DLGAP2Q9P1A6 1054 aa21.63■■□□□ 1.05
SYNE2-201ENST00000341472 FAM237AA0A1B0GTK4 181 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 ZNF263O14978 683 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 CST3P01034 146 aaPredicted RBP21.62■■□□□ 1.05
SYNE2-201ENST00000341472 CD72P21854 359 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 CDC25CP30307 473 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 NDUFA8P51970 172 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 BECN1Q14457 450 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 ZNF852Q6ZMS4 543 aa21.62■■□□□ 1.05
SYNE2-201ENST00000341472 TPRG1Q6ZUI0 275 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms