RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 WDR18Q9BV38 432 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 SNX24Q9Y343 169 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 TRIM17Q9Y577 477 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 POLR2AP24928 1970 aaKnown RBP12.47□□□□□ -0.41
RTN3-203ENST00000341307 FOSP01100 380 aaPredicted RBP12.47□□□□□ -0.41
RTN3-203ENST00000341307 ANPEPP15144 967 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 COASYQ13057 564 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 TGFBIQ15582 683 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 KCTD21Q4G0X4 260 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 CPXCR1Q8N123 301 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 ARHGAP24Q8N264 748 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 ZFP28Q8NHY6 868 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 DEFB129Q9H1M3 183 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 ZHX3Q9H4I2 956 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 NRDE2Q9H7Z3 1164 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 ZNF408Q9H9D4 720 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 GRHL1Q9NZI5 618 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 SELENONQ9NZV5 590 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 ANGPTL2Q9UKU9 493 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 TTLL3Q9Y4R7 772 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 IGLV3-22A0A075B6J6 115 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 A0A087X0T9 212 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 PVALEFA0A1B0GWK0 134 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 PIK3CDO00329 1044 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 EML1O00423 815 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 KIAA0391O15091 583 aaKnown RBP12.46□□□□□ -0.41
RTN3-203ENST00000341307 CHMP2AO43633 222 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 BUD23O43709 281 aaKnown RBP12.46□□□□□ -0.41
RTN3-203ENST00000341307 TOMM70O94826 608 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 TFAP2AP05549 437 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 FAM228BP0C875 321 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 SPATA31C1P0DKV0 1188 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 SLC5A2P31639 672 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 TMED10P49755 219 aaKnown RBP12.46□□□□□ -0.41
RTN3-203ENST00000341307 EXOC3L4Q17RC7 722 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 FAAH2Q6GMR7 532 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 USP50Q70EL3 339 aaPredicted RBP12.46□□□□□ -0.41
RTN3-203ENST00000341307 GPBP1Q86WP2 473 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 ALDH16A1Q8IZ83 802 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 SPOCK2Q92563 424 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 CCT7Q99832 543 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 BCAS3Q9H6U6 928 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 HOMER2Q9NSB8 354 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 RABL2AQ9UBK7 228 aaPredicted RBP12.46□□□□□ -0.41
RTN3-203ENST00000341307 GIT1Q9Y2X7 761 aa12.46□□□□□ -0.41
RTN3-203ENST00000341307 DGKIO75912 1065 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 POLR2MP0CAP2 368 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 BRAFP15056 766 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 COPB2P35606 906 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 PPIDQ08752 370 aaKnown RBP12.46□□□□□ -0.42
RTN3-203ENST00000341307 PRKG1Q13976 671 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 SLC18A3Q16572 532 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 FAM209AQ5JX71 171 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 HYIQ5T013 277 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 METTL21CQ5VZV1 264 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 MOXD1Q6UVY6 613 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 GIPC3Q8TF64 312 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 GLG1Q92896 1179 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 SAR1AQ9NR31 198 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 ZDHHC7Q9NXF8 308 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 ZNHIT2Q9UHR6 403 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 ZFP69BQ9UJL9 534 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 PHTF1Q9UMS5 762 aa12.46□□□□□ -0.42
RTN3-203ENST00000341307 GPC6Q9Y625 555 aaPredicted RBP12.46□□□□□ -0.42
RTN3-203ENST00000341307 ZNF536O15090 1300 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 KDM3AQ9Y4C1 1321 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 ATAD5Q96QE3 1844 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 A0A1W2PQ67 120 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 BICDL2A1A5D9 508 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 FUOMA2VDF0 154 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 RASA4BC9J798 803 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 RASA4O43374 803 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 USP1O94782 785 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 ZBED1O96006 694 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 ENDOUP21128 410 aaKnown RBP12.45□□□□□ -0.42
RTN3-203ENST00000341307 CIITAP33076 1130 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 PTENP60484 403 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 COG7P83436 770 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 DR1Q01658 176 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 MTMR2Q13614 643 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 NADK2Q4G0N4 442 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 SLC9C1Q4G0N8 1177 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 ARSHQ5FYA8 562 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 SYCP2LQ5T4T6 812 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 CENPPQ6IPU0 288 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 PHLDB2Q86SQ0 1253 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 WDR75Q8IWA0 830 aaKnown RBP12.45□□□□□ -0.42
RTN3-203ENST00000341307 STARD8Q92502 1023 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 NEURL2Q9BR09 285 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 ROPN1BQ9BZX4 212 aaPredicted RBP12.45□□□□□ -0.42
RTN3-203ENST00000341307 ROPN1Q9HAT0 212 aaPredicted RBP12.45□□□□□ -0.42
RTN3-203ENST00000341307 SLCO1B3Q9NPD5 702 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 FEM1BQ9UK73 627 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 VAV3Q9UKW4 847 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 CCDC162PA2VCL2 907 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 CCDC160A6NGH7 325 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 NFIBO00712 420 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 CCDC22O60826 627 aa12.45□□□□□ -0.42
RTN3-203ENST00000341307 ITGBL1O95965 494 aaPredicted RBP12.45□□□□□ -0.42
RTN3-203ENST00000341307 NAT2P11245 290 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms