RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 RTP3Q9BQQ7 232 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 MMRN2Q9H8L6 949 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 LMBRD1Q9NUN5 540 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 PCDHB5Q9Y5E4 795 aa20.56■□□□□ 0.88
SYNE4-202ENST00000340477 DCXO43602 365 aa20.55■□□□□ 0.88
SYNE4-202ENST00000340477 WARSP23381 471 aaKnown RBP20.55■□□□□ 0.88
SYNE4-202ENST00000340477 GTF2H1P32780 548 aa20.55■□□□□ 0.88
SYNE4-202ENST00000340477 GCLMP48507 274 aa20.55■□□□□ 0.88
SYNE4-202ENST00000340477 VEPH1Q14D04 833 aa20.55■□□□□ 0.88
SYNE4-202ENST00000340477 SGSM1Q2NKQ1 1148 aa20.55■□□□□ 0.88
SYNE4-202ENST00000340477 DCAF17Q5H9S7 520 aaPredicted RBP20.55■□□□□ 0.88
SYNE4-202ENST00000340477 INTS6LQ5JSJ4 861 aaKnown RBP20.55■□□□□ 0.88
SYNE4-202ENST00000340477 FOXR2Q6PJQ5 311 aa20.55■□□□□ 0.88
SYNE4-202ENST00000340477 SV2AQ7L0J3 742 aa20.55■□□□□ 0.88
SYNE4-202ENST00000340477 LEMD2Q8NC56 503 aa20.55■□□□□ 0.88
SYNE4-202ENST00000340477 EEF2KMTQ96G04 330 aa20.55■□□□□ 0.88
SYNE4-202ENST00000340477 CEP63Q96MT8 703 aa20.55■□□□□ 0.88
SYNE4-202ENST00000340477 VRTNQ9H8Y1 702 aa20.55■□□□□ 0.88
SYNE4-202ENST00000340477 METTL14Q9HCE5 456 aaKnown RBP20.55■□□□□ 0.88
SYNE4-202ENST00000340477 ABI2Q9NYB9 513 aaPredicted RBP20.55■□□□□ 0.88
SYNE4-202ENST00000340477 ARMCX3Q9UH62 379 aaPredicted RBP20.55■□□□□ 0.88
SYNE4-202ENST00000340477 ZFP37Q9Y6Q3 630 aaPredicted RBP20.55■□□□□ 0.88
SYNE4-202ENST00000340477 TACC1O75410 805 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 FGFR1OPO95684 399 aaKnown RBP20.54■□□□□ 0.88
SYNE4-202ENST00000340477 FAM163BP0C2L3 166 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 CD44P16070 742 aaKnown RBP20.54■□□□□ 0.88
SYNE4-202ENST00000340477 TRIM21P19474 475 aaKnown RBP20.54■□□□□ 0.88
SYNE4-202ENST00000340477 ACAT1P24752 427 aaKnown RBP20.54■□□□□ 0.88
SYNE4-202ENST00000340477 MXI1P50539 228 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 PMS1P54277 932 aaKnown RBP20.54■□□□□ 0.88
SYNE4-202ENST00000340477 MAPRE1Q15691 268 aaKnown RBP20.54■□□□□ 0.88
SYNE4-202ENST00000340477 MGAT5BQ3V5L5 792 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 CCDC40Q4G0X9 1142 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 CYP4A22Q5TCH4 519 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 SCARA3Q6AZY7 606 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 PDZD4Q76G19 769 aaPredicted RBP20.54■□□□□ 0.88
SYNE4-202ENST00000340477 ITIH5Q86UX2 942 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 ZC3H3Q8IXZ2 948 aaKnown RBP20.54■□□□□ 0.88
SYNE4-202ENST00000340477 ATAD1Q8NBU5 361 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 OR6B3Q8NGW1 331 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 FEZF2Q8TBJ5 459 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 FAM200AQ8TCP9 573 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 SYT15Q9BQS2 421 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 CORO1BQ9BR76 489 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 TMEM8AQ9HCN3 771 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 ASAH2Q9NR71 780 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 MUTYHQ9UIF7 546 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 CDH9Q9ULB4 789 aa20.54■□□□□ 0.88
SYNE4-202ENST00000340477 MRPS23Q9Y3D9 190 aaKnown RBP20.54■□□□□ 0.88
SYNE4-202ENST00000340477 PPP1R3GB7ZBB8 358 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 ZNF197O14709 1029 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 GABRDO14764 452 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 HLA-DRAP01903 254 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 RHOP08100 348 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 TAF12Q16514 161 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 KRT39Q6A163 491 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 C4orf50Q6ZRC1 276 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 OSTM1Q86WC4 334 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 SPATA2LQ8IUW3 424 aaPredicted RBP20.53■□□□□ 0.88
SYNE4-202ENST00000340477 DNAI2Q9GZS0 605 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 XYLT2Q9H1B5 865 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 HCFC1R1Q9NWW0 138 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 DNMT3BQ9UBC3 853 aaKnown RBP20.53■□□□□ 0.88
SYNE4-202ENST00000340477 DACH1Q9UI36 760 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 SLC27A5Q9Y2P5 690 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 ASB3Q9Y575 518 aa20.53■□□□□ 0.88
SYNE4-202ENST00000340477 VNN1O95497 513 aa20.52■□□□□ 0.88
SYNE4-202ENST00000340477 BMP6P22004 513 aa20.52■□□□□ 0.88
SYNE4-202ENST00000340477 GNL1P36915 607 aaPredicted RBP20.52■□□□□ 0.88
SYNE4-202ENST00000340477 NTHL1P78549 312 aa20.52■□□□□ 0.88
SYNE4-202ENST00000340477 SCARA5Q6ZMJ2 495 aa20.52■□□□□ 0.88
SYNE4-202ENST00000340477 LIMS2Q7Z4I7 341 aa20.52■□□□□ 0.88
SYNE4-202ENST00000340477 KBTBD7Q8WVZ9 684 aa20.52■□□□□ 0.88
SYNE4-202ENST00000340477 ABCB6Q9NP58 842 aa20.52■□□□□ 0.88
SYNE4-202ENST00000340477 AVENQ9NQS1 362 aaPredicted RBP20.52■□□□□ 0.88
SYNE4-202ENST00000340477 A8MXQ7 604 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 VNN2O95498 520 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 FGF19O95750 216 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 GNA14O95837 355 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 MBD3O95983 291 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 ASS1P00966 412 aaKnown RBP20.51■□□□□ 0.87
SYNE4-202ENST00000340477 PPP3CAQ08209 521 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 MTMR3Q13615 1198 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 PTPN21Q16825 1174 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 C1orf220Q5T0J3 134 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 TTI2Q6NXR4 508 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 FRMD5Q7Z6J6 570 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 FILIP1Q7Z7B0 1213 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 LRRTM3Q86VH5 581 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 MLKLQ8NB16 471 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 FUBP3Q96I24 572 aaKnown RBP eCLIP20.51■□□□□ 0.87
SYNE4-202ENST00000340477 MRPL45Q9BRJ2 306 aaKnown RBP20.51■□□□□ 0.87
SYNE4-202ENST00000340477 C1QTNF1Q9BXJ1 281 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 SMYD3Q9H7B4 428 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 EPS15L1Q9UBC2 864 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 LIMD1Q9UGP4 676 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 CDH7Q9ULB5 785 aa20.51■□□□□ 0.87
SYNE4-202ENST00000340477 DOCK6Q96HP0 2047 aa20.5■□□□□ 0.87
SYNE4-202ENST00000340477 PI4K2BG5E9Z4 385 aa20.5■□□□□ 0.87
SYNE4-202ENST00000340477 PDGFRBP09619 1106 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms