RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 LIMS2Q7Z4I7 341 aa15.68■□□□□ 0.1
ERCC1-203ENST00000340192 OSTM1Q86WC4 334 aa15.68■□□□□ 0.1
ERCC1-203ENST00000340192 SMYD4Q8IYR2 804 aaPredicted RBP15.68■□□□□ 0.1
ERCC1-203ENST00000340192 GUF1Q8N442 669 aaKnown RBP15.68■□□□□ 0.1
ERCC1-203ENST00000340192 LEMD2Q8NC56 503 aa15.68■□□□□ 0.1
ERCC1-203ENST00000340192 SPATA18Q8TC71 538 aa15.68■□□□□ 0.1
ERCC1-203ENST00000340192 PARD3BQ8TEW8 1205 aa15.68■□□□□ 0.1
ERCC1-203ENST00000340192 ABI2Q9NYB9 513 aaPredicted RBP15.68■□□□□ 0.1
ERCC1-203ENST00000340192 FBXL21Q9UKT6 434 aa15.68■□□□□ 0.1
ERCC1-203ENST00000340192 FRMD4BQ9Y2L6 1034 aa15.68■□□□□ 0.1
ERCC1-203ENST00000340192 LRRIQ3A6PVS8 624 aaPredicted RBP15.67■□□□□ 0.1
ERCC1-203ENST00000340192 GABRDO14764 452 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 HCRTO43612 131 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 CFHP08603 1231 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 SRFP11831 508 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 TUFMP49411 452 aaKnown RBP15.67■□□□□ 0.1
ERCC1-203ENST00000340192 CLDN10P78369 228 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 CEP135Q66GS9 1140 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 DPH6Q7L8W6 267 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 TMC8Q8IU68 726 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 SPPL2BQ8TCT7 592 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 KBTBD7Q8WVZ9 684 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 PSMG2Q969U7 264 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 MMS19Q96T76 1030 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 KXD1Q9BQD3 176 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 LPIN3Q9BQK8 851 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 LRRC3Q9BY71 257 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 ASB3Q9Y575 518 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 PCDHB5Q9Y5E4 795 aa15.67■□□□□ 0.1
ERCC1-203ENST00000340192 PHACTR2O75167 634 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 MOSPD3O75425 235 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 HAPLN1P10915 354 aaPredicted RBP15.66■□□□□ 0.1
ERCC1-203ENST00000340192 GJA1P17302 382 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 ATF6P18850 670 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 NR2F2P24468 414 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 PCSK1P29120 753 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 AP3M2P53677 418 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 MYL6P60660 151 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 DLG4P78352 724 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 TRPC3Q13507 836 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 NFE2Q16621 373 aaPredicted RBP15.66■□□□□ 0.1
ERCC1-203ENST00000340192 NFIL3Q16649 462 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 WDR72Q3MJ13 1102 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 INTS6LQ5JSJ4 861 aaKnown RBP15.66■□□□□ 0.1
ERCC1-203ENST00000340192 TDRD10Q5VZ19 366 aaKnown RBP15.66■□□□□ 0.1
ERCC1-203ENST00000340192 DNAJB7Q7Z6W7 309 aaPredicted RBP15.66■□□□□ 0.1
ERCC1-203ENST00000340192 ITIH5Q86UX2 942 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 SIX5Q8N196 739 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 SHKBP1Q8TBC3 707 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 FAM200AQ8TCP9 573 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 ERCC4Q92889 916 aaPredicted RBP15.66■□□□□ 0.1
ERCC1-203ENST00000340192 ZSWIM3Q96MP5 696 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 TIGD1Q96MW7 591 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 GSDMAQ96QA5 445 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 PKMYT1Q99640 499 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 MFSD1Q9H3U5 465 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 ZNF334Q9HCZ1 680 aaPredicted RBP15.66■□□□□ 0.1
ERCC1-203ENST00000340192 RMND1Q9NWS8 449 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 GTF3C4Q9UKN8 822 aa15.66■□□□□ 0.1
ERCC1-203ENST00000340192 PTPRDP23468 1912 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 DENND4CQ5VZ89 1909 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 A0A1W2PRU2 124 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 SMC2O95347 1197 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 STAU1O95793 577 aaKnown RBP15.65■□□□□ 0.1
ERCC1-203ENST00000340192 WARSP23381 471 aaKnown RBP15.65■□□□□ 0.1
ERCC1-203ENST00000340192 LMO2P25791 158 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 VCPP55072 806 aaKnown RBP15.65■□□□□ 0.1
ERCC1-203ENST00000340192 TNNC1P63316 161 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 BIRC3Q13489 604 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 VEPH1Q14D04 833 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 TEAD2Q15562 447 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 CCDC142Q17RM4 750 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 FAM78AQ5JUQ0 283 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 SPATA20Q8TB22 786 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 TMC2Q8TDI7 906 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 GPR152Q8TDT2 470 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 SMARCE1Q969G3 411 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 SYAP1Q96A49 352 aaPredicted RBP15.65■□□□□ 0.1
ERCC1-203ENST00000340192 PI4K2AQ9BTU6 479 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 XYLT2Q9H1B5 865 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 SLC2A4RGQ9NR83 387 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 WNT16Q9UBV4 365 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 HOOK1Q9UJC3 728 aaKnown RBP15.65■□□□□ 0.1
ERCC1-203ENST00000340192 ARIH1Q9Y4X5 557 aaPredicted RBP15.65■□□□□ 0.1
ERCC1-203ENST00000340192 PCDHA5Q9Y5H7 936 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 OBSL1O75147 1896 aa15.65■□□□□ 0.1
ERCC1-203ENST00000340192 MYBPHLA2RUH7 354 aa15.64■□□□□ 0.09
ERCC1-203ENST00000340192 MAPK13O15264 365 aa15.64■□□□□ 0.09
ERCC1-203ENST00000340192 ATP2C2O75185 946 aa15.64■□□□□ 0.09
ERCC1-203ENST00000340192 GADD45BO75293 160 aaPredicted RBP15.64■□□□□ 0.09
ERCC1-203ENST00000340192 ECI2O75521 394 aa15.64■□□□□ 0.09
ERCC1-203ENST00000340192 AKAP3O75969 853 aa15.64■□□□□ 0.09
ERCC1-203ENST00000340192 VNN1O95497 513 aa15.64■□□□□ 0.09
ERCC1-203ENST00000340192 C4BPAP04003 597 aaKnown RBP15.64■□□□□ 0.09
ERCC1-203ENST00000340192 PDGFRBP09619 1106 aa15.64■□□□□ 0.09
ERCC1-203ENST00000340192 FCARP24071 287 aa15.64■□□□□ 0.09
ERCC1-203ENST00000340192 CYP2F1P24903 491 aa15.64■□□□□ 0.09
ERCC1-203ENST00000340192 RPL13P26373 211 aaKnown RBP15.64■□□□□ 0.09
ERCC1-203ENST00000340192 AVPR2P30518 371 aa15.64■□□□□ 0.09
ERCC1-203ENST00000340192 ATICP31939 592 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms