RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CYP26C1Q6V0L0 522 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 ATAD1Q8NBU5 361 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 TAS1R2Q8TE23 839 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 ACBD6Q9BR61 282 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 PI4K2AQ9BTU6 479 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 RHOBTB2Q9BYZ6 727 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 CRISPLD1Q9H336 500 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 METTL14Q9HCE5 456 aaKnown RBP16.34■□□□□ 0.21
UBE3B-201ENST00000340074 MAFFQ9ULX9 164 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 INSL5Q9Y5Q6 135 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 GREB1Q4ZG55 1949 aa16.33■□□□□ 0.21
UBE3B-201ENST00000340074 LRRN2O75325 713 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 TACC1O75410 805 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 ASS1P00966 412 aaKnown RBP16.33■□□□□ 0.2
UBE3B-201ENST00000340074 LRG1P02750 347 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 WARSP23381 471 aaKnown RBP16.33■□□□□ 0.2
UBE3B-201ENST00000340074 SP100P23497 879 aaPredicted RBP16.33■□□□□ 0.2
UBE3B-201ENST00000340074 LMO2P25791 158 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 MXI1P50539 228 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 TSPY1Q01534 308 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 DUSP4Q13115 394 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 CBWD6Q4V339 395 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 CBWD3Q5JTY5 395 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 CBWD5Q5RIA9 395 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 CCDC183Q5T5S1 534 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 SLC35C1Q96A29 364 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 RPGRIP1Q96KN7 1286 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 SMYD3Q9H7B4 428 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 SLC27A5Q9Y2P5 690 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 NME7Q9Y5B8 376 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 TRIOO75962 3097 aa16.33■□□□□ 0.2
UBE3B-201ENST00000340074 DENND4CQ5VZ89 1909 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 ATP2C2O75185 946 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 XYLBO75191 536 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 FGFR1OPO95684 399 aaKnown RBP16.32■□□□□ 0.2
UBE3B-201ENST00000340074 PCSK1P29120 753 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 RAP1GAPP47736 663 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 CDH8P55286 799 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 INTS6LQ5JSJ4 861 aaKnown RBP16.32■□□□□ 0.2
UBE3B-201ENST00000340074 SCARA5Q6ZMJ2 495 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 GRASPQ7Z6J2 395 aaPredicted RBP16.32■□□□□ 0.2
UBE3B-201ENST00000340074 DCP1BQ8IZD4 617 aaKnown RBP16.32■□□□□ 0.2
UBE3B-201ENST00000340074 TTC9BQ8N6N2 239 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 TAF4BQ92750 862 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 SEMA4DQ92854 862 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 IMPG2Q9BZV3 1241 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 SDCBP2Q9H190 292 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 WDR6Q9NNW5 1121 aaKnown RBP16.32■□□□□ 0.2
UBE3B-201ENST00000340074 CD320Q9NPF0 282 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 TMLHEQ9NVH6 421 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 HCFC1R1Q9NWW0 138 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 TMEM63CQ9P1W3 806 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 DACH1Q9UI36 760 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 TTC28Q96AY4 2481 aa16.32■□□□□ 0.2
UBE3B-201ENST00000340074 C19orf67A6NJJ6 358 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 GNA14O95837 355 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 PDGFRBP09619 1106 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 FAM163BP0C2L3 166 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 SSTR3P32745 418 aaPredicted RBP16.31■□□□□ 0.2
UBE3B-201ENST00000340074 GNL1P36915 607 aaPredicted RBP16.31■□□□□ 0.2
UBE3B-201ENST00000340074 MARSP56192 900 aaKnown RBP16.31■□□□□ 0.2
UBE3B-201ENST00000340074 PSMC1P62191 440 aaKnown RBP16.31■□□□□ 0.2
UBE3B-201ENST00000340074 NOP14P78316 857 aaKnown RBP16.31■□□□□ 0.2
UBE3B-201ENST00000340074 TWF1Q12792 350 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 CCDC142Q17RM4 750 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 FBXL13Q8NEE6 735 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 OR6B3Q8NGW1 331 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 PKMYT1Q99640 499 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 SNX25Q9H3E2 840 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 APOBEC3GQ9HC16 384 aaKnown RBP16.31■□□□□ 0.2
UBE3B-201ENST00000340074 RAB20Q9NX57 234 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 ABI2Q9NYB9 513 aaPredicted RBP16.31■□□□□ 0.2
UBE3B-201ENST00000340074 DNMT3BQ9UBC3 853 aaKnown RBP16.31■□□□□ 0.2
UBE3B-201ENST00000340074 GTF3C4Q9UKN8 822 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 YIPF1Q9Y548 306 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 BDP1A6H8Y1 2624 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 CLUHO75153 1309 aa16.31■□□□□ 0.2
UBE3B-201ENST00000340074 ZNF638Q14966 1978 aaKnown RBP16.31■□□□□ 0.2
UBE3B-201ENST00000340074 MYBPHLA2RUH7 354 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 LOC730098B7Z3J9 87 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 SOAT2O75908 522 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 POU2F2P09086 479 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 CCDC192P0DO97 292 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 P4HA1P13674 534 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 ERCC5P28715 1186 aaPredicted RBP16.3■□□□□ 0.2
UBE3B-201ENST00000340074 ASPAP45381 313 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 NTHL1P78549 312 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 SMARCB1Q12824 385 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 NFE2Q16621 373 aaPredicted RBP16.3■□□□□ 0.2
UBE3B-201ENST00000340074 GJD3Q8N144 294 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 CCDC150Q8NCX0 1101 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 SPPL2BQ8TCT7 592 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 C2orf15Q8WU43 125 aaKnown RBP16.3■□□□□ 0.2
UBE3B-201ENST00000340074 SYT15Q9BQS2 421 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 HSFX1Q9UBD0 423 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 CDH9Q9ULB4 789 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 NR2E1Q9Y466 385 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 PCDHB5Q9Y5E4 795 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 OBSL1O75147 1896 aa16.3■□□□□ 0.2
UBE3B-201ENST00000340074 ALDH1A3P47895 512 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms