RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 TPTEP56180 551 aa10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 SPARCL1Q14515 664 aa10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 PERM1Q5SV97 790 aa10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 C6orf163Q5TEZ5 329 aa10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 ALKBH5Q6P6C2 394 aaKnown RBP10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 AAGABQ6PD74 315 aa10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 CCDC137Q6PK04 289 aaKnown RBP10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 LVRNQ6Q4G3 990 aa10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 CYP4V2Q6ZWL3 525 aaPredicted RBP10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 CPNE8Q86YQ8 564 aa10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 PRELID2Q8N945 189 aa10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 DDX17Q92841 729 aaKnown RBP10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 PMEPA1Q969W9 287 aa10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 MARCH7Q9H992 704 aa10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 ZDHHC7Q9NXF8 308 aa10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 DTNAQ9Y4J8 743 aa10.13□□□□□ -0.79
PTCHD4-201ENST00000339488 H0YIN7 160 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 GOLGA8RI6L899 631 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 PRKAB2O43741 272 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 IDH1O75874 414 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 CRTAMO95727 393 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 CRYZL1O95825 349 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 PIM1P11309 404 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 VEGFAP15692 232 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 ADORA1P30542 326 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 SLC25A3Q00325 362 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 BNIP3Q12983 259 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 PKN2Q16513 984 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 DCLRE1AQ6PJP8 1040 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 C4orf22Q6V702 233 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 CADM3Q8N126 398 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 PSD4Q8NDX1 1056 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 MAML1Q92585 1016 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 ITPKCQ96DU7 683 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 DCUN1D1Q96GG9 259 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 FEM1CQ96JP0 617 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 CTRCQ99895 268 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 WDR70Q9NW82 654 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 AMFRQ9UKV5 643 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 DNAJC16Q9Y2G8 782 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 AP4B1Q9Y6B7 739 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 ADGRA3Q8IWK6 1321 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 A0A1W2PPM1 405 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 CCRL2O00421 344 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 DDX3YO15523 660 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 TTLL1O95922 423 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 KRT15P19012 456 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 ATP5DP30049 168 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 IFNA8P32881 189 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 IREB2P48200 963 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 TUBA1BP68363 451 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 SNAPC2Q13487 334 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 STK11Q15831 433 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 PDK4Q16654 411 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 TRMT5Q32P41 509 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 RALGPS1Q5JS13 557 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 TCHHL1Q5QJ38 904 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 LDLRAP1Q5SW96 308 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 MAP3K21Q5TCX8 1036 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 IL23RQ5VWK5 629 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 TUBA1AQ71U36 451 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 NET1Q7Z628 596 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 TRIML2Q8N7C3 387 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 LILRB4Q8NHJ6 448 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 KRT35Q92764 455 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 ZFRQ96KR1 1074 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 ROPN1BQ9BZX4 212 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 ROPN1Q9HAT0 212 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 CYP4F11Q9HBI6 524 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 CCDC177Q9NQR7 707 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 SCHIP1Q9P0W5 487 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 BCAP29Q9UHQ4 241 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 CDC14AQ9UNH5 594 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 ERVK-11Q9UQG0 969 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 CHD4Q14839 1912 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 NRKQ7Z2Y5 1582 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 ZMYM2Q9UBW7 1377 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 ATP5J2-PTCD1G3V325 749 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 PTCD1O75127 700 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 ABCB1P08183 1280 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 CD48P09326 243 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 RAP1GDS1P52306 607 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 PEX6Q13608 980 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 CEP78Q5JTW2 689 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 PLEKHA7Q6IQ23 1121 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 DYMQ7RTS9 669 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 BTLAQ7Z6A9 289 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 CCDC84Q86UT8 332 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 CALML6Q8TD86 181 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 TRABDQ9H4I3 376 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 QPCTLQ9NXS2 382 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 NINJ2Q9NZG7 142 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 NAGPAQ9UK23 515 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 PCDHA3Q9Y5H8 950 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 MON2Q7Z3U7 1717 aa10.12□□□□□ -0.79
PTCHD4-201ENST00000339488 FAM237BA0A1B0GVD1 139 aa10.11□□□□□ -0.79
PTCHD4-201ENST00000339488 FAM187AA6NFU0 413 aa10.11□□□□□ -0.79
PTCHD4-201ENST00000339488 SIN3BO75182 1162 aa10.11□□□□□ -0.79
PTCHD4-201ENST00000339488 SEC24DO94855 1032 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms