RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 EIF4BP23588 611 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 RAD23BP54727 409 aa13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 CDH8P55286 799 aa13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 NFX1Q12986 1120 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 TTLL4Q14679 1199 aa13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SLMAPQ14BN4 828 aa13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 LRRC38Q5VT99 294 aa13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 KIAA0319LQ8IZA0 1049 aa13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 NIPA2Q8N8Q9 360 aa13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ATL2Q8NHH9 583 aa13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ATXN2LQ8WWM7 1075 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SNF8Q96H20 258 aa13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SMYD3Q9H7B4 428 aa13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ASIC3Q9UHC3 531 aa13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 FAM169AQ9Y6X4 670 aa13.74□□□□□ -0.21
CDK5RAP1-201ENST00000339269 C5orf60A6NFR6 353 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 FAM107AO95990 144 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ORC1Q13415 861 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 TRPC3Q13507 836 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 TFDP1Q14186 410 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 WDR78Q5VTH9 848 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SMYD5Q6GMV2 418 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 MFSD5Q6N075 450 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 DNAJC24Q6P3W2 148 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 TRMT10CQ7L0Y3 403 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 CCDC50Q8IVM0 306 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 TMEM35BQ8NCS4 154 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 C3orf20Q8ND61 904 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ACSF2Q96CM8 615 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 MPHOSPH6Q99547 160 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 JPH2Q9BR39 696 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 C16orf70Q9BSU1 422 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ZNF518BQ9C0D4 1074 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ELOVL4Q9GZR5 314 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 EVPLQ92817 2033 aa13.73□□□□□ -0.21
CDK5RAP1-201ENST00000339269 A0A087WZ62 844 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 MANSC4A6NHS7 340 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 EBAG9O00559 213 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 LIASO43766 372 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 STAG3L1P0CL83 205 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 PTPN7P35236 360 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 IGBP1P78318 339 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 POU5F1BQ06416 359 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 CCDC142Q17RM4 750 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ZNF484Q5JVG2 852 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 JADE1Q6IE81 842 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 C6orf89Q6UWU4 347 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 CCDC25Q86WR0 208 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SLC4A11Q8NBS3 891 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 JOSD2Q8TAC2 188 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 PPP1R16BQ96T49 567 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 FDXACB1Q9BRP7 624 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 BEGAINQ9BUH8 593 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 LHX5Q9H2C1 402 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 PPANQ9NQ55 473 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 DNAJC17Q9NVM6 304 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ERAP1Q9NZ08 941 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 NXF1Q9UBU9 619 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 hCG_1818297A0A087WSY0 165 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ASB14A6NK59 587 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SMIM23A6NLE4 172 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 E7EVH7 732 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ASAP2O43150 1006 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 IL18RAPO95256 599 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 TNNC2P02585 160 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 KRT1P04264 644 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ZNF286BP0CG31 522 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ATF2P15336 505 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 CDKN2BP42772 138 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SLCO1A2P46721 670 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 VPS41P49754 854 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 GTF2A2P52657 109 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SLC25A11Q02978 314 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SREBF2Q12772 1141 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 CALCOCO2Q13137 446 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SLC10A6Q3KNW5 377 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ERMARDQ5T6L9 678 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SPOCD1Q6ZMY3 1216 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 C10orf67Q8IYJ2 551 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 RCOR2Q8IZ40 523 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 GRK7Q8WTQ7 553 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 AFG1LQ8WV93 481 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ANKRD36BP1Q96IX9 119 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 CPB2Q96IY4 423 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 MS4A4AQ96JQ5 239 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 CPXM1Q96SM3 734 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 RPF1Q9H9Y2 349 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 PRMT7Q9NVM4 692 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 NINJ2Q9NZG7 142 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 DNPEPQ9ULA0 475 aa13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ATXN2Q99700 1313 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP1-201ENST00000339269 CCL15-CCL14A0A0B4J2E2 113 aa13.71□□□□□ -0.21
CDK5RAP1-201ENST00000339269 TLDC2A0PJX2 215 aa13.71□□□□□ -0.21
CDK5RAP1-201ENST00000339269 GMNCA6NCL1 334 aa13.71□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SNAI1O95863 264 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP1-201ENST00000339269 AGTP01019 485 aa13.71□□□□□ -0.21
CDK5RAP1-201ENST00000339269 VTNP04004 478 aa13.71□□□□□ -0.21
CDK5RAP1-201ENST00000339269 MCF2P10911 925 aa13.71□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ARF4P18085 180 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms