RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 GET4Q7L5D6 327 aaPredicted RBP12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 LEMD2Q8NC56 503 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 OR10T2Q8NGX3 314 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 ZNF516Q92618 1163 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 TAF4BQ92750 862 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 FAM84AQ96KN4 292 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 DNAI2Q9GZS0 605 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 ASB3Q9Y575 518 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 PCDHB5Q9Y5E4 795 aa12.14□□□□□ -0.47
SLC28A1-202ENST00000338602 MTMR11A4FU01 709 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 TACC1O75410 805 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 FGFR1OPO95684 399 aaKnown RBP12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 PIK3CAP42336 1068 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 DLG4P78352 724 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 TAF12Q16514 161 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 SOWAHAQ2M3V2 549 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 MGAT5BQ3V5L5 792 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 ZACNQ401N2 412 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 TDRD10Q5VZ19 366 aaKnown RBP12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 KLHL10Q6JEL2 608 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 FOXR2Q6PJQ5 311 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 SV2AQ7L0J3 742 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 ITIH5Q86UX2 942 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 ATAD1Q8NBU5 361 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 FAM200AQ8TCP9 573 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 PLEKHO2Q8TD55 490 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 NXPE3Q969Y0 559 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 CEP63Q96MT8 703 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 CORO1BQ9BR76 489 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 GZF1Q9H116 711 aaPredicted RBP12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 VRTNQ9H8Y1 702 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 METTL14Q9HCE5 456 aaKnown RBP12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 NXF1Q9UBU9 619 aaKnown RBP12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 CDH9Q9ULB4 789 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 MRPS23Q9Y3D9 190 aaKnown RBP12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 YIPF1Q9Y548 306 aa12.13□□□□□ -0.47
SLC28A1-202ENST00000338602 GABRDO14764 452 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 FGF19O95750 216 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 GNA14O95837 355 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 RHOP08100 348 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 WARSP23381 471 aaKnown RBP12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 GNL1P36915 607 aaPredicted RBP12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 INTS6LQ5JSJ4 861 aaKnown RBP12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 TCERG1LQ5VWI1 586 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 KRT39Q6A163 491 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 C4orf50Q6ZRC1 276 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 PDZD4Q76G19 769 aaPredicted RBP12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 SPATA2LQ8IUW3 424 aaPredicted RBP12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 OR6B3Q8NGW1 331 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 NELFBQ8WX92 580 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 TMEM209Q96SK2 561 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 SEPT5Q99719 369 aaPredicted RBP12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 RTP3Q9BQQ7 232 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 NUP62CLQ9H1M0 184 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 CLSTN2Q9H4D0 955 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 MMRN2Q9H8L6 949 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 TMEM8AQ9HCN3 771 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 AVENQ9NQS1 362 aaPredicted RBP12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 ASAH2Q9NR71 780 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 ABI2Q9NYB9 513 aaPredicted RBP12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 IGSF9Q9P2J2 1179 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 DNMT3BQ9UBC3 853 aaKnown RBP12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 LIMD1Q9UGP4 676 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 ARMCX3Q9UH62 379 aaPredicted RBP12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 MUTYHQ9UIF7 546 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 CDH7Q9ULB5 785 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 SORCS3Q9UPU3 1222 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 SLC27A5Q9Y2P5 690 aa12.12□□□□□ -0.47
SLC28A1-202ENST00000338602 A8MXQ7 604 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 PPP1R3GB7ZBB8 358 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 HLA-DRAP01903 254 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 TRIM49P0CI25 452 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 TRIM49CP0CI26 452 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 LAMP2P13473 410 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 ACAT1P24752 427 aaKnown RBP12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 GCLMP48507 274 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 RPL10AP62906 217 aaKnown RBP12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 NTHL1P78549 312 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 NHLH1Q02575 133 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 PAK1Q13153 545 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 MTMR3Q13615 1198 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 PTPN21Q16825 1174 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 CCDC40Q4G0X9 1142 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 LIMS2Q7Z4I7 341 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 FILIP1Q7Z7B0 1213 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 ZC3H3Q8IXZ2 948 aaKnown RBP12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 UBALD2Q8IYN6 164 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 EEF2KMTQ96G04 330 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 FUBP3Q96I24 572 aaKnown RBP eCLIP12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 SYT15Q9BQS2 421 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 XYLT2Q9H1B5 865 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 ABCB6Q9NP58 842 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 LMBRD1Q9NUN5 540 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 HCFC1R1Q9NWW0 138 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 EPS15L1Q9UBC2 864 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 DACH1Q9UI36 760 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 GTF3C4Q9UKN8 822 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 CTNND2Q9UQB3 1225 aa12.11□□□□□ -0.47
SLC28A1-202ENST00000338602 TRIM49BA6NDI0 452 aa12.1□□□□□ -0.47
SLC28A1-202ENST00000338602 MICAL2O94851 1124 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms