RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 VPS13AQ96RL7 3174 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 FAM186AA6NE01 2351 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 CALUO43852 315 aaPredicted RBP16.39■□□□□ 0.21
PRKN-201ENST00000338468 HUS1O60921 280 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 SOAT2O75908 522 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 PTPN2P17706 415 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 MYO1EQ12965 1108 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 HTR4Q13639 388 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 CCDC142Q17RM4 750 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 TDRD10Q5VZ19 366 aaKnown RBP16.39■□□□□ 0.21
PRKN-201ENST00000338468 NPAS3Q8IXF0 933 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 ELOA2Q8IYF1 753 aaPredicted RBP16.39■□□□□ 0.21
PRKN-201ENST00000338468 HS6ST3Q8IZP7 471 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 THEM5Q8N1Q8 247 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 TMEM86AQ8N2M4 240 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 TOP6BLQ8N6T0 577 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 ST13P5Q8NFI4 369 aaPredicted RBP16.39■□□□□ 0.21
PRKN-201ENST00000338468 KBTBD7Q8WVZ9 684 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 TCEAL4Q96EI5 215 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 CCDC34Q96HJ3 373 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 GSDMAQ96QA5 445 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 CORO1BQ9BR76 489 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 LRRC3Q9BY71 257 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 XYLT2Q9H1B5 865 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 MFSD1Q9H3U5 465 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 DDX43Q9NXZ2 648 aaKnown RBP16.39■□□□□ 0.21
PRKN-201ENST00000338468 IGSF9Q9P2J2 1179 aa16.39■□□□□ 0.21
PRKN-201ENST00000338468 MOSPD3O75425 235 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 AKAP3O75969 853 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 KIF20AO95235 890 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 VNN1O95497 513 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 C4BPAP04003 597 aaKnown RBP16.38■□□□□ 0.21
PRKN-201ENST00000338468 CEBPBP17676 345 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 ACAT1P24752 427 aaKnown RBP16.38■□□□□ 0.21
PRKN-201ENST00000338468 ANP32AP39687 249 aaKnown RBP16.38■□□□□ 0.21
PRKN-201ENST00000338468 PRCPP42785 496 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 EPHA5P54756 1037 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 MYL6P60660 151 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 TDGQ13569 410 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 COBLL1Q53SF7 1204 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 ZNF658Q5TYW1 1059 aaPredicted RBP16.38■□□□□ 0.21
PRKN-201ENST00000338468 CEP135Q66GS9 1140 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 ASTLQ6HA08 431 aaPredicted RBP16.38■□□□□ 0.21
PRKN-201ENST00000338468 DPH6Q7L8W6 267 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 ADGRF2Q8IZF7 708 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 SPATA18Q8TC71 538 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 TMC2Q8TDI7 906 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 ING5Q8WYH8 240 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 ACBD6Q9BR61 282 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 RMND1Q9NWS8 449 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 HSFX1Q9UBD0 423 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 MRPS23Q9Y3D9 190 aaKnown RBP16.38■□□□□ 0.21
PRKN-201ENST00000338468 NME7Q9Y5B8 376 aa16.38■□□□□ 0.21
PRKN-201ENST00000338468 ZFP37Q9Y6Q3 630 aaPredicted RBP16.38■□□□□ 0.21
PRKN-201ENST00000338468 MAPK13O15264 365 aa16.37■□□□□ 0.21
PRKN-201ENST00000338468 NARSO43776 548 aaKnown RBP16.37■□□□□ 0.21
PRKN-201ENST00000338468 STAU1O95793 577 aaKnown RBP16.37■□□□□ 0.21
PRKN-201ENST00000338468 NR2F2P24468 414 aa16.37■□□□□ 0.21
PRKN-201ENST00000338468 PARM1Q6UWI2 310 aa16.37■□□□□ 0.21
PRKN-201ENST00000338468 ERMP1Q7Z2K6 904 aa16.37■□□□□ 0.21
PRKN-201ENST00000338468 TMC8Q8IU68 726 aa16.37■□□□□ 0.21
PRKN-201ENST00000338468 SLC44A3Q8N4M1 653 aa16.37■□□□□ 0.21
PRKN-201ENST00000338468 FGF14Q92915 247 aa16.37■□□□□ 0.21
PRKN-201ENST00000338468 NKD2Q969F2 451 aaPredicted RBP16.37■□□□□ 0.21
PRKN-201ENST00000338468 SMARCE1Q969G3 411 aa16.37■□□□□ 0.21
PRKN-201ENST00000338468 RPP25Q9BUL9 199 aaKnown RBP16.37■□□□□ 0.21
PRKN-201ENST00000338468 DMDP11532 3685 aa16.37■□□□□ 0.21
PRKN-201ENST00000338468 KINO60870 393 aaKnown RBP16.36■□□□□ 0.21
PRKN-201ENST00000338468 SMC2O95347 1197 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 HAPLN1P10915 354 aaPredicted RBP16.36■□□□□ 0.21
PRKN-201ENST00000338468 ATF6P18850 670 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 BMP6P22004 513 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 WARSP23381 471 aaKnown RBP16.36■□□□□ 0.21
PRKN-201ENST00000338468 LMO2P25791 158 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 PMS1P54277 932 aaKnown RBP16.36■□□□□ 0.21
PRKN-201ENST00000338468 MCCD1P59942 119 aaPredicted RBP16.36■□□□□ 0.21
PRKN-201ENST00000338468 ADAM9Q13443 819 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 INTS6LQ5JSJ4 861 aaKnown RBP16.36■□□□□ 0.21
PRKN-201ENST00000338468 FRMD5Q7Z6J6 570 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 DCP1BQ8IZD4 617 aaKnown RBP16.36■□□□□ 0.21
PRKN-201ENST00000338468 ELMOD1Q8N336 334 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 C2orf15Q8WU43 125 aaKnown RBP16.36■□□□□ 0.21
PRKN-201ENST00000338468 NXPE3Q969Y0 559 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 ELMO3Q96BJ8 720 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 ZNF512Q96ME7 567 aaPredicted RBP16.36■□□□□ 0.21
PRKN-201ENST00000338468 LPIN3Q9BQK8 851 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 MRPL45Q9BRJ2 306 aaKnown RBP16.36■□□□□ 0.21
PRKN-201ENST00000338468 ZNF334Q9HCZ1 680 aaPredicted RBP16.36■□□□□ 0.21
PRKN-201ENST00000338468 MAN1B1Q9UKM7 699 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 DUSP12Q9UNI6 340 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 FRMD4BQ9Y2L6 1034 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 R3HCC1Q9Y3T6 440 aaKnown RBP16.36■□□□□ 0.21
PRKN-201ENST00000338468 NUMBLQ9Y6R0 609 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 GVINP1Q7Z2Y8 2422 aa16.36■□□□□ 0.21
PRKN-201ENST00000338468 MYBPHLA2RUH7 354 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 ATP2C2O75185 946 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 MICAL2O94851 1124 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 GJA1P17302 382 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 ATICP31939 592 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 ALDH1A3P47895 512 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms