RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 A0A0A6YYK5 440 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 KIAA0355O15063 1070 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ATMINO43313 823 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 RAG1P15918 1043 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 WARSP23381 471 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 DSC1Q08554 894 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TIGD5Q53EQ6 642 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 WSCD1Q658N2 575 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 DENND1BQ6P3S1 775 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CD300LGQ6UXG3 332 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.67■□□□□ 0.11e-10■■■■■ 46
CDK5RAP3-201ENST00000338399 OSTM1Q86WC4 334 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CRIPAKQ8N1N5 446 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 C12orf29Q8N999 325 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TRIM58Q8NG06 486 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 SLC35G2Q8TBE7 412 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ZNF653Q96CK0 615 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CASD1Q96PB1 797 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 FAM193BQ96PV7 902 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 DPEP3Q9H4B8 488 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 OSGEPQ9NPF4 335 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CHORDC1Q9UHD1 332 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 STXBP5LQ9Y2K9 1186 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 F8W810 466 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 I3L4J1 428 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 LSM8O95777 96 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 BRCC3P46736 316 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 AARSP49588 968 aaKnown RBP eCLIP15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CNGA2Q16280 664 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 C2CD6Q53TS8 623 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 DCLRE1AQ6PJP8 1040 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 UBE2Q1Q7Z7E8 422 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 COLGALT2Q8IYK4 626 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 MCOLN2Q8IZK6 566 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 WDTC1Q8N5D0 677 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TMEM35BQ8NCS4 154 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 C1orf131Q8NDD1 294 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 RFFLQ8WZ73 363 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ALS2CR12Q96Q35 445 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 LPIN3Q9BQK8 851 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 KIAA1257Q9ULG3 409 aa15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TIMM13Q9Y5L4 95 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-201ENST00000338399 FNDC1Q4ZHG4 1894 aaPredicted RBP15.66■□□□□ 0.1
CDK5RAP3-201ENST00000338399 O00370 1275 aa15.66■□□□□ 0.1
CDK5RAP3-201ENST00000338399 MICAL2O94851 1124 aa15.66■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ITGB1P05556 798 aa15.66■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CSF2RAP15509 400 aa15.66■□□□□ 0.1
CDK5RAP3-201ENST00000338399 NPAS4Q8IUM7 802 aa15.66■□□□□ 0.1
CDK5RAP3-201ENST00000338399 NAPGQ99747 312 aaPredicted RBP15.66■□□□□ 0.1
CDK5RAP3-201ENST00000338399 C11orf70Q9BRQ4 267 aa15.66■□□□□ 0.1
CDK5RAP3-201ENST00000338399 FAM49BQ9NUQ9 324 aa15.66■□□□□ 0.1
CDK5RAP3-201ENST00000338399 DNAJB4Q9UDY4 337 aa15.66■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CEP83Q9Y592 693 aa15.66■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ALPK3Q96L96 1907 aa15.66■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CTAGE9A4FU28 777 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ENC1O14682 589 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 HOXA2O43364 376 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 PALMO75781 387 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 UPP2O95045 317 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 KIF4AO95239 1232 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 FAM163BP0C2L3 166 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CDH5P33151 784 aaPredicted RBP15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 OR1G1P47890 313 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 IFI16Q16666 785 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 PPP1R26Q5T8A7 1209 aaPredicted RBP15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 MFSD5Q6N075 450 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 MMS22LQ6ZRQ5 1243 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 MON1BQ7L1V2 547 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 PHLDB2Q86SQ0 1253 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 PHF13Q86YI8 300 aaPredicted RBP15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ZNF518BQ9C0D4 1074 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 LHX5Q9H2C1 402 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 ADAM22Q9P0K1 906 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CTTNBP2NLQ9P2B4 639 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CNOT8Q9UFF9 292 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 GTF3C4Q9UKN8 822 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TSPAN16Q9UKR8 245 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 COG5Q9UP83 839 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 GRID2IPA4D2P6 1211 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TBKBP1A7MCY6 615 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 M0QYV0 167 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 GABRDO14764 452 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 URI1O94763 535 aaPredicted RBP15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CYP1A2P05177 515 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 PPP1R2P3Q6NXS1 205 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 LCLAT1Q6UWP7 414 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 RHOT2Q8IXI1 618 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CRYBG2Q8N1P7 616 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TMEM86AQ8N2M4 240 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TMEM199Q8N511 208 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TPCN2Q8NHX9 752 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 UBA3Q8TBC4 463 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 NRDE2Q9H7Z3 1164 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 CYTH4Q9UIA0 394 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 PCDHGC5Q9Y5F6 944 aa15.65■□□□□ 0.1
CDK5RAP3-201ENST00000338399 TSC2P49815 1807 aa15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 LTBP2Q14767 1821 aa15.64■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ATP1A1P05023 1023 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms