RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 BFARQ9NZS9 450 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 SETD1AO15047 1707 aaKnown RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 F5H423 210 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 EIF4BP23588 611 aaKnown RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 RTP1P59025 263 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 TSPY1Q01534 308 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 MTM1Q13496 603 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 ZACNQ401N2 412 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 RWDD4Q6NW29 188 aaKnown RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 AENQ8WTP8 325 aaKnown RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 TGS1Q96RS0 853 aaKnown RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 FHDC1Q9C0D6 1143 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 CYP3A43Q9HB55 503 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 TMBIM4Q9HC24 238 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 GIPC1O14908 333 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 CAVIN3Q969G5 261 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 GRAMD1AQ96CP6 724 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 SGSM3Q96HU1 749 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 TACO1Q9BSH4 297 aaKnown RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 PNPLA4P41247 253 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 FMO1Q01740 532 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 SMTNL2Q2TAL5 461 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 TREML2Q5T2D2 321 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 SPOCD1Q6ZMY3 1216 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 TADA2BQ86TJ2 420 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 DMAC2Q9NW81 257 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 FAM208AQ9UK61 1670 aaKnown RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 DCTN3O75935 186 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 LCA5LO95447 670 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 ACADSBP45954 432 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 AP1B1Q10567 949 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 GOLGA7BQ2TAP0 167 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 CELF3Q5SZQ8 465 aaKnown RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 C4orf33Q8N1A6 199 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 CDT1Q9H211 546 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 PSTPIP1O43586 416 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 SPATA18Q8TC71 538 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 PRMT1Q99873 361 aaKnown RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 CDC42EP4Q9H3Q1 356 aaKnown RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 ASB7Q9H672 318 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 RARAP10276 462 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 OTUD4Q01804 1114 aaKnown RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 NXNQ6DKJ4 435 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 KDM7AQ6ZMT4 941 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 DAW1Q8N136 415 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 C7orf43Q8WVR3 580 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 KRT35Q92764 455 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 TMEM176AQ96HP8 235 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 SEMA4AQ9H3S1 761 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 ABHD16BQ9H3Z7 469 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 CHST7Q9NS84 486 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 FRMD3A2A2Y4 597 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 BTNL10A8MVZ5 291 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 CPT1AP50416 773 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 MFSD14AQ96MC6 490 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 SMYD2Q9NRG4 433 aa6.61□□□□□ -1.35
PRKDC-202ENST00000338368 ZNF214Q9UL59 606 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-202ENST00000338368 EEF1DP3Q658K8 133 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 SMG5Q9UPR3 1016 aaKnown RBP6.6□□□□□ -1.35
PRKDC-202ENST00000338368 RAP1GAPP47736 663 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 NOMO3P69849 1222 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 GBP7Q8N8V2 638 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-202ENST00000338368 GJB6O95452 261 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 ESRRAP11474 423 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-202ENST00000338368 CHN1P15882 459 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 SESN2P58004 480 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-202ENST00000338368 AADACL2Q6P093 401 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-202ENST00000338368 WDR75Q8IWA0 830 aaKnown RBP6.6□□□□□ -1.35
PRKDC-202ENST00000338368 CCDC68Q9H2F9 335 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 COL14A1Q05707 1796 aaKnown RBP6.6□□□□□ -1.35
PRKDC-202ENST00000338368 MYH7BA7E2Y1 1941 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 CAND2O75155 1236 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 APRTP07741 180 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 ADORA2AP29274 412 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 ACVR2BQ13705 512 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 SLC27A1Q6PCB7 646 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 SPATA21Q7Z572 469 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 VPS11Q9H270 941 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 GPATCH2LQ9NWQ4 482 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 PCK1P35558 622 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 ZNF280AP59817 542 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-202ENST00000338368 ATP13A4Q4VNC1 1196 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 SMC1BQ8NDV3 1235 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 MDM1Q8TC05 714 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 LRRC15Q8TF66 581 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 OSMRQ99650 979 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.6□□□□□ -1.35
PRKDC-202ENST00000338368 XPO7Q9UIA9 1087 aaKnown RBP6.6□□□□□ -1.35
PRKDC-202ENST00000338368 ZNF541Q9H0D2 1346 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 CFAP69A5D8W1 941 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 CPB1P15086 417 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 COG7P83436 770 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 PLCB4Q15147 1175 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 C12orf42Q96LP6 360 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 ST6GALNAC4Q9H4F1 302 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 CRCPO75575 148 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 RGS2P41220 211 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 TNFSF9P41273 254 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 TMPRSS15P98073 1019 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms