RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 SERPINB4P48594 390 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 CAPSQ13938 189 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 DENND2CQ68D51 928 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 HOOK3Q86VS8 718 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 TEX9Q8N6V9 391 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 TMEM174Q8WUU8 243 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 PRPF31Q8WWY3 499 aaKnown RBP14.67□□□□□ -0.06
SF1-202ENST00000334944 CENPTQ96BT3 561 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 OTUD5Q96G74 571 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 CLMNQ96JQ2 1002 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 PORCNQ9H237 461 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 C17orf75Q9HAS0 396 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 RNPEPL1Q9HAU8 725 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 PREBQ9HCU5 417 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 GPRC5DQ9NZD1 345 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 RASAL2Q9UJF2 1139 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 HAO1Q9UJM8 370 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 LRRC42Q9Y546 428 aa14.67□□□□□ -0.06
SF1-202ENST00000334944 GSTTP1A0A1W2PQM5 241 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 SSC5DA1L4H1 1573 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 THAP12O43422 761 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 PPFIA2O75334 1257 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 DDNO94850 711 aaPredicted RBP14.66□□□□□ -0.06
SF1-202ENST00000334944 ACSL3O95573 720 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 GGPS1O95749 300 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 TPBGLP0DKB5 382 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 GBP1P32455 592 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 TCF7P36402 384 aaPredicted RBP14.66□□□□□ -0.06
SF1-202ENST00000334944 RCN2Q14257 317 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 CNGA2Q16280 664 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 FAM182AQ5T1J6 154 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 C15orf39Q6ZRI6 1047 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 ANKS1BQ7Z6G8 1248 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 ANKLE1Q8NAG6 615 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 MAIP1Q8WWC4 291 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 DNAJC9Q8WXX5 260 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 CDHR1Q96JP9 859 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 RHBDL2Q9NX52 303 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 ASIC3Q9UHC3 531 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.66□□□□□ -0.06
SF1-202ENST00000334944 SOWAHBA6NEL2 793 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 CALB2P22676 271 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 GNA15P30679 374 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 TAS2R40P59535 323 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 GCNT1Q02742 428 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 ORC1Q13415 861 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 DHX34Q14147 1143 aaKnown RBP14.66□□□□□ -0.06
SF1-202ENST00000334944 MYLK4Q86YV6 388 aaPredicted RBP14.66□□□□□ -0.06
SF1-202ENST00000334944 APOBEC3FQ8IUX4 373 aaKnown RBP14.66□□□□□ -0.06
SF1-202ENST00000334944 MTMR12Q9C0I1 747 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 DHX33Q9H6R0 707 aaKnown RBP14.66□□□□□ -0.06
SF1-202ENST00000334944 ELP3Q9H9T3 547 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 MTUS1Q9ULD2 1270 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 PCDHB2Q9Y5E7 798 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 MAFBQ9Y5Q3 323 aaPredicted RBP14.66□□□□□ -0.06
SF1-202ENST00000334944 SNCAIPQ9Y6H5 919 aa14.66□□□□□ -0.06
SF1-202ENST00000334944 PMM2O15305 246 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 COQ9O75208 318 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 ARIH2O95376 493 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 PSMC4P43686 418 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 OAZ1P54368 228 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 NOP14P78316 857 aaKnown RBP14.65□□□□□ -0.06
SF1-202ENST00000334944 KRT17Q04695 432 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 PSMD6Q15008 389 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 HSDL1Q3SXM5 330 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 KAZNQ674X7 775 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 ASRGL1Q7L266 308 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 C12orf42Q96LP6 360 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 UVRAGQ9P2Y5 699 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 PARP14Q460N5 1801 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 NFASCO94856 1347 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 DOCK1Q14185 1865 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 FAM187AA6NFU0 413 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 DKC1O60832 514 aaKnown RBP eCLIP14.65□□□□□ -0.06
SF1-202ENST00000334944 FARP2O94887 1054 aaPredicted RBP14.65□□□□□ -0.06
SF1-202ENST00000334944 EPHB2P29323 1055 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 STAT5BP51692 787 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 RPL7AP62424 266 aaKnown RBP14.65□□□□□ -0.06
SF1-202ENST00000334944 CUL2Q13617 745 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 EIF1ADQ8N9N8 165 aaKnown RBP14.65□□□□□ -0.06
SF1-202ENST00000334944 RBBP8NLQ8NC74 664 aaPredicted RBP14.65□□□□□ -0.06
SF1-202ENST00000334944 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.65□□□□□ -0.064e-7■■□□□ 12.4
SF1-202ENST00000334944 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.65□□□□□ -0.062e-6■■■■□ 19.4
SF1-202ENST00000334944 COPS5Q92905 334 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 VTI1AQ96AJ9 217 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 TXLNGYQ9BZA5 131 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 DNAAF2Q9NVR5 837 aaKnown RBP14.65□□□□□ -0.06
SF1-202ENST00000334944 USH1CQ9Y6N9 552 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 RGPD3A6NKT7 1758 aaPredicted RBP14.65□□□□□ -0.06
SF1-202ENST00000334944 RGPD4Q7Z3J3 1758 aa14.65□□□□□ -0.06
SF1-202ENST00000334944 ZSCAN9O15535 394 aaPredicted RBP14.64□□□□□ -0.07
SF1-202ENST00000334944 WEE2P0C1S8 567 aa14.64□□□□□ -0.07
SF1-202ENST00000334944 RALAP11233 206 aa14.64□□□□□ -0.07
SF1-202ENST00000334944 ACO1P21399 889 aaKnown RBP14.64□□□□□ -0.07
SF1-202ENST00000334944 LONRF1Q17RB8 773 aa14.64□□□□□ -0.07
SF1-202ENST00000334944 OR52E8Q6IFG1 317 aa14.64□□□□□ -0.07
SF1-202ENST00000334944 ZC3H18Q86VM9 953 aaKnown RBP14.64□□□□□ -0.07
SF1-202ENST00000334944 THNSL1Q8IYQ7 743 aa14.64□□□□□ -0.07
SF1-202ENST00000334944 FAM13CQ8NE31 585 aa14.64□□□□□ -0.07
SF1-202ENST00000334944 PABPC3Q9H361 631 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms