RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 PTPN7P35236 360 aa24.67■■□□□ 1.54
NDEL1-201ENST00000334527 CDKN2BP42772 138 aa24.67■■□□□ 1.54
NDEL1-201ENST00000334527 ELF3P78545 371 aaPredicted RBP24.67■■□□□ 1.54
NDEL1-201ENST00000334527 LAMTOR4Q0VGL1 99 aa24.67■■□□□ 1.54
NDEL1-201ENST00000334527 FASTKD3Q14CZ7 662 aaKnown RBP24.67■■□□□ 1.54
NDEL1-201ENST00000334527 PPP1R21Q6ZMI0 780 aa24.67■■□□□ 1.54
NDEL1-201ENST00000334527 EEPD1Q7L9B9 569 aa24.67■■□□□ 1.54
NDEL1-201ENST00000334527 RNF149Q8NC42 400 aa24.67■■□□□ 1.54
NDEL1-201ENST00000334527 TTC25Q96NG3 672 aa24.67■■□□□ 1.54
NDEL1-201ENST00000334527 BTBD7Q9P203 1132 aa24.67■■□□□ 1.54
NDEL1-201ENST00000334527 CPSF3Q9UKF6 684 aaKnown RBP24.67■■□□□ 1.54
NDEL1-201ENST00000334527 SSC5DA1L4H1 1573 aa24.67■■□□□ 1.54
NDEL1-201ENST00000334527 BRCA1P38398 1863 aaKnown RBP24.67■■□□□ 1.54
NDEL1-201ENST00000334527 EIF4BP23588 611 aaKnown RBP24.66■■□□□ 1.54
NDEL1-201ENST00000334527 PLCB3Q01970 1234 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 OASLQ15646 514 aaKnown RBP24.66■■□□□ 1.54
NDEL1-201ENST00000334527 LY6KQ17RY6 165 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 ZNF699Q32M78 642 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 IER5Q5VY09 327 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 CDCA2Q69YH5 1023 aaPredicted RBP24.66■■□□□ 1.54
NDEL1-201ENST00000334527 LBX2Q6XYB7 198 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 PCDHGC3Q9UN70 934 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 AGAP1Q9UPQ3 857 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 EDNRBP24530 442 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 GCAP28676 217 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 MKRN3Q13064 507 aaKnown RBP24.66■■□□□ 1.54
NDEL1-201ENST00000334527 MORF4L2Q15014 288 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 MAPK6Q16659 721 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 SH3D19Q5HYK7 790 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 ZBTB8OSQ8IWT0 167 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 LRRC71Q8N4P6 559 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 NIPA2Q8N8Q9 360 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 TMEM121Q9BTD3 319 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 ARL2BPQ9Y2Y0 163 aa24.66■■□□□ 1.54
NDEL1-201ENST00000334527 MGRN1O60291 552 aa24.65■■□□□ 1.54
NDEL1-201ENST00000334527 CDH5P33151 784 aaPredicted RBP24.65■■□□□ 1.54
NDEL1-201ENST00000334527 WDR72Q3MJ13 1102 aa24.65■■□□□ 1.54
NDEL1-201ENST00000334527 METTL7BQ6UX53 244 aa24.65■■□□□ 1.54
NDEL1-201ENST00000334527 FAM47DPA6NHR8 397 aa24.65■■□□□ 1.54
NDEL1-201ENST00000334527 POC1B-GALNT4F8VUJ3 575 aa24.65■■□□□ 1.54
NDEL1-201ENST00000334527 SGK1O00141 431 aa24.65■■□□□ 1.54
NDEL1-201ENST00000334527 ABLIM1O14639 778 aa24.65■■□□□ 1.54
NDEL1-201ENST00000334527 ITGAVP06756 1048 aa24.65■■□□□ 1.54
NDEL1-201ENST00000334527 RDXP35241 583 aaKnown RBP24.65■■□□□ 1.54
NDEL1-201ENST00000334527 ASPAP45381 313 aa24.65■■□□□ 1.54
NDEL1-201ENST00000334527 BAG6P46379 1132 aa24.65■■□□□ 1.54
NDEL1-201ENST00000334527 SURF1Q15526 300 aa24.65■■□□□ 1.54
NDEL1-201ENST00000334527 RNASEH2BQ5TBB1 312 aaKnown RBP24.65■■□□□ 1.54
NDEL1-201ENST00000334527 FAM228AQ86W67 206 aa24.65■■□□□ 1.54
NDEL1-201ENST00000334527 NKD2Q969F2 451 aaPredicted RBP24.65■■□□□ 1.54
NDEL1-201ENST00000334527 GOLGA8SH3BPF8 625 aa24.64■■□□□ 1.54
NDEL1-201ENST00000334527 IFNB1P01574 187 aa24.64■■□□□ 1.54
NDEL1-201ENST00000334527 HOXC6P09630 235 aa24.64■■□□□ 1.54
NDEL1-201ENST00000334527 DENND1BQ6P3S1 775 aa24.64■■□□□ 1.54
NDEL1-201ENST00000334527 CAPN12Q6ZSI9 719 aa24.64■■□□□ 1.54
NDEL1-201ENST00000334527 TRABD2AQ86V40 505 aa24.64■■□□□ 1.54
NDEL1-201ENST00000334527 NCAPG2Q86XI2 1143 aa24.64■■□□□ 1.54
NDEL1-201ENST00000334527 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.64■■□□□ 1.54
NDEL1-201ENST00000334527 TCP11Q8WWU5 503 aa24.64■■□□□ 1.54
NDEL1-201ENST00000334527 FAM167AQ96KS9 214 aa24.64■■□□□ 1.54
NDEL1-201ENST00000334527 VPS37BQ9H9H4 285 aa24.64■■□□□ 1.54
NDEL1-201ENST00000334527 OSTNP61366 133 aa24.64■■□□□ 1.53
NDEL1-201ENST00000334527 IL9RQ01113 521 aa24.64■■□□□ 1.53
NDEL1-201ENST00000334527 NR1H3Q13133 447 aa24.64■■□□□ 1.53
NDEL1-201ENST00000334527 MXD4Q14582 209 aaPredicted RBP24.64■■□□□ 1.53
NDEL1-201ENST00000334527 CGB2Q6NT52 195 aa24.64■■□□□ 1.53
NDEL1-201ENST00000334527 TBC1D1Q86TI0 1168 aaPredicted RBP24.64■■□□□ 1.53
NDEL1-201ENST00000334527 TRIM50Q86XT4 487 aa24.64■■□□□ 1.53
NDEL1-201ENST00000334527 RIOX2Q8IUF8 465 aa24.64■■□□□ 1.53
NDEL1-201ENST00000334527 THNSL1Q8IYQ7 743 aa24.64■■□□□ 1.53
NDEL1-201ENST00000334527 ZBED8Q8IZ13 594 aa24.64■■□□□ 1.53
NDEL1-201ENST00000334527 PAIP2Q9BPZ3 127 aaKnown RBP24.64■■□□□ 1.53
NDEL1-201ENST00000334527 XYLT2Q9H1B5 865 aa24.64■■□□□ 1.53
NDEL1-201ENST00000334527 AGTPBP1Q9UPW5 1226 aa24.64■■□□□ 1.53
NDEL1-201ENST00000334527 SPAG7O75391 227 aa24.63■■□□□ 1.53
NDEL1-201ENST00000334527 PSMA2P25787 234 aa24.63■■□□□ 1.53
NDEL1-201ENST00000334527 RFC1P35251 1148 aaPredicted RBP24.63■■□□□ 1.53
NDEL1-201ENST00000334527 LACTBP83111 547 aaPredicted RBP24.63■■□□□ 1.53
NDEL1-201ENST00000334527 ZWILCHQ9H900 591 aa24.63■■□□□ 1.53
NDEL1-201ENST00000334527 PCDH9Q9HC56 1237 aa24.63■■□□□ 1.53
NDEL1-201ENST00000334527 NXF1Q9UBU9 619 aaKnown RBP24.63■■□□□ 1.53
NDEL1-201ENST00000334527 PRKAG3Q9UGI9 489 aa24.63■■□□□ 1.53
NDEL1-201ENST00000334527 STRIP2Q9ULQ0 834 aa24.63■■□□□ 1.53
NDEL1-201ENST00000334527 CFAP73A6NFT4 308 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 TGFB3P10600 412 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 TAC1P20366 129 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 FOXN2P32314 431 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 PSMC4P43686 418 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 DYNLT1P63172 113 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 SMTNL2Q2TAL5 461 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 GALNTL6Q49A17 601 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 TDRPQ86YL5 185 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 PLCD4Q9BRC7 762 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 ECT2Q9H8V3 914 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 POLIQ9UNA4 740 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 SHOC2Q9UQ13 582 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 SRCAPQ6ZRS2 3230 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 C3orf70A6NLC5 250 aaPredicted RBP24.62■■□□□ 1.53
NDEL1-201ENST00000334527 TNNC2P02585 160 aa24.62■■□□□ 1.53
NDEL1-201ENST00000334527 CD19P15391 556 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms