RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 FAM20AQ96MK3 541 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 OXCT2Q9BYC2 517 aaPredicted RBP12.46□□□□□ -0.41
LIMK2-202ENST00000333611 GLT8D2Q9H1C3 349 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 TOPORSQ9NS56 1045 aaPredicted RBP12.46□□□□□ -0.41
LIMK2-202ENST00000333611 UTP6Q9NYH9 597 aaKnown RBP12.46□□□□□ -0.41
LIMK2-202ENST00000333611 ANAPC5Q9UJX4 755 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 AK5Q9Y6K8 562 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 EXOC1LA0A1B0GW35 172 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 MEI4A8MW99 385 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 SLC16A4O15374 487 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 PENKP01210 267 aaPredicted RBP12.46□□□□□ -0.41
LIMK2-202ENST00000333611 GSTT2P0CG29 244 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 GSTT2BP0CG30 244 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 BMP3P12645 472 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 TAC1P20366 129 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 HALP42357 657 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 ECE1P42892 770 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 KPNA1P52294 538 aaPredicted RBP12.46□□□□□ -0.41
LIMK2-202ENST00000333611 ITGA8P53708 1063 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 SH3BGRP55822 239 aaPredicted RBP12.46□□□□□ -0.41
LIMK2-202ENST00000333611 AP2B1P63010 937 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 SPARCL1Q14515 664 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 PSMD6Q15008 389 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 THOC7Q6I9Y2 204 aaKnown RBP12.46□□□□□ -0.41
LIMK2-202ENST00000333611 ZNF720Q7Z2F6 126 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 NOP9Q86U38 636 aaKnown RBP12.46□□□□□ -0.41
LIMK2-202ENST00000333611 ANKRD35Q8N283 1001 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 POU5F2Q8N7G0 328 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 LENG9Q96B70 501 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 SLC7A6OSQ96CW6 309 aaPredicted RBP12.46□□□□□ -0.41
LIMK2-202ENST00000333611 CLIP3Q96DZ5 547 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 DNAJC18Q9H819 358 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 TRIM17Q9Y577 477 aa12.46□□□□□ -0.41
LIMK2-202ENST00000333611 PEX1O43933 1283 aa12.46□□□□□ -0.42
LIMK2-202ENST00000333611 GAS8O95995 478 aa12.46□□□□□ -0.42
LIMK2-202ENST00000333611 ARP10275 920 aa12.46□□□□□ -0.42
LIMK2-202ENST00000333611 ALDH1B1P30837 517 aa12.46□□□□□ -0.42
LIMK2-202ENST00000333611 MAPK4P31152 587 aa12.46□□□□□ -0.42
LIMK2-202ENST00000333611 PTGIRP43119 386 aa12.46□□□□□ -0.42
LIMK2-202ENST00000333611 NPEPPSP55786 919 aa12.46□□□□□ -0.42
LIMK2-202ENST00000333611 PEX3P56589 373 aa12.46□□□□□ -0.42
LIMK2-202ENST00000333611 CROCCP2Q86T23 111 aa12.46□□□□□ -0.42
LIMK2-202ENST00000333611 MTBPQ96DY7 904 aa12.46□□□□□ -0.42
LIMK2-202ENST00000333611 PRPF18Q99633 342 aaKnown RBP12.46□□□□□ -0.42
LIMK2-202ENST00000333611 MIPEPQ99797 713 aa12.46□□□□□ -0.42
LIMK2-202ENST00000333611 WRAP73Q9P2S5 460 aaPredicted RBP12.46□□□□□ -0.42
LIMK2-202ENST00000333611 PACSIN3Q9UKS6 424 aa12.46□□□□□ -0.42
LIMK2-202ENST00000333611 CNTNAP4Q9C0A0 1308 aa12.46□□□□□ -0.42
LIMK2-202ENST00000333611 MIF4GDA9UHW6 222 aaKnown RBP12.45□□□□□ -0.42
LIMK2-202ENST00000333611 IFNB1P01574 187 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 NUDT17P0C025 328 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 CCNB1P14635 433 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 IL1R1P14778 569 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 CRKP46108 304 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 NT5C2P49902 561 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 PADI6Q6TGC4 694 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 TRIML2Q8N7C3 387 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 GATA6Q92908 595 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 RUNDC3BQ96NL0 473 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 WDR18Q9BV38 432 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 TDRD3Q9H7E2 651 aaKnown RBP12.45□□□□□ -0.42
LIMK2-202ENST00000333611 KRT82Q9NSB4 513 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 SCAF8Q9UPN6 1271 aaKnown RBP12.45□□□□□ -0.42
LIMK2-202ENST00000333611 IRS2Q9Y4H2 1338 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 GOLGA8SH3BPF8 625 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 GOLGA8MH3BSY2 632 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 PCYT1AP49585 367 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 HSP90AA5PQ58FG0 334 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 FAM182AQ5T1J6 154 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 FAM102BQ5T8I3 360 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 CGB2Q6NT52 195 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 KLHL35Q6PF15 583 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 TTC7BQ86TV6 843 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 GABPB2Q8TAK5 448 aaPredicted RBP12.45□□□□□ -0.42
LIMK2-202ENST00000333611 CPA5Q8WXQ8 436 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 SLC5A5Q92911 643 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 MAGEB18Q96M61 343 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 TRNAU1APQ9NX07 287 aaKnown RBP12.45□□□□□ -0.42
LIMK2-202ENST00000333611 VAV3Q9UKW4 847 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 SPATA31A5Q5VU36 1347 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 SPATA31A7Q8IWB4 1347 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 SCN7AQ01118 1682 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 DLEC1Q9Y238 1755 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 FAM47DPA6NHR8 397 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 PI4K2BG5E9Z4 385 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 PPEF1O14829 653 aaPredicted RBP12.45□□□□□ -0.42
LIMK2-202ENST00000333611 KRT38O76015 456 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 ZBTB48P10074 688 aaPredicted RBP12.45□□□□□ -0.42
LIMK2-202ENST00000333611 RARGP13631 454 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 ATF7P17544 494 aaPredicted RBP12.45□□□□□ -0.42
LIMK2-202ENST00000333611 OCRLQ01968 901 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 NCOA4Q13772 614 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 RNF43Q68DV7 783 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 ANKLE1Q8NAG6 615 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 TTC17Q96AE7 1141 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 PRR11Q96HE9 360 aaPredicted RBP12.45□□□□□ -0.42
LIMK2-202ENST00000333611 BTBD10Q9BSF8 475 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 GPR88Q9GZN0 384 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 NAALADL1Q9UQQ1 740 aa12.45□□□□□ -0.42
LIMK2-202ENST00000333611 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms