RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 RAPGEF5Q92565 580 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 PIWIL1Q96J94 861 aaKnown RBP9.54□□□□□ -0.88
COPB2-201ENST00000333188 ZMAT2Q96NC0 199 aaKnown RBP9.54□□□□□ -0.88
COPB2-201ENST00000333188 RAB17Q9H0T7 212 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 SNX25Q9H3E2 840 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 SEMA4AQ9H3S1 761 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 DPEP3Q9H4B8 488 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 TMEM134Q9H6X4 195 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 RNF14Q9UBS8 474 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 MTRF1LQ9UGC7 380 aaKnown RBP9.54□□□□□ -0.88
COPB2-201ENST00000333188 TSPAN16Q9UKR8 245 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 IGKV6D-21A0A0A0MT36 114 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 E5RJQ4 531 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 TSPAN1O60635 241 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 TUBBP07437 444 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 P4HA1P13674 534 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 LMO2P25791 158 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 RTP1P59025 263 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 BASP1P80723 227 aaKnown RBP9.54□□□□□ -0.88
COPB2-201ENST00000333188 PTPN11Q06124 597 aaPredicted RBP9.54□□□□□ -0.88
COPB2-201ENST00000333188 KRT81Q14533 505 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 LRRC14Q15048 493 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 PTPN20Q4JDL3 420 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 ENOSF1Q7L5Y1 443 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 STKLD1Q8NE28 680 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 DDX1Q92499 740 aaKnown RBP9.54□□□□□ -0.88
COPB2-201ENST00000333188 CFAP57Q96MR6 1250 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 SEPT10Q9P0V9 454 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 SIX4Q9UIU6 781 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 NUDT5Q9UKK9 219 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 MROH7Q68CQ1 1323 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 TARSL2A2RTX5 802 aaKnown RBP9.54□□□□□ -0.88
COPB2-201ENST00000333188 CCDC66A2RUB6 948 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 H7C0C1 242 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 BANF1O75531 89 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 CD48P09326 243 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 ATF2P15336 505 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 RPL21P46778 160 aaKnown RBP9.54□□□□□ -0.88
COPB2-201ENST00000333188 ATP5OP48047 213 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 SEC24CP53992 1094 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 ATXN1P54253 815 aaKnown RBP9.54□□□□□ -0.88
COPB2-201ENST00000333188 ATN1P54259 1190 aaPredicted RBP9.54□□□□□ -0.88
COPB2-201ENST00000333188 SNRPFP62306 86 aaKnown RBP9.54□□□□□ -0.88
COPB2-201ENST00000333188 RBP5P82980 135 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 MMRN1Q13201 1228 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 SLC29A2Q14542 456 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 KYNUQ16719 465 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 ZNF662Q6ZS27 426 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 ANKMY2Q8IV38 441 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 ACTRT1Q8TDG2 376 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 CEP41Q9BYV8 373 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 MAGEB5Q9BZ81 275 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 ELOVL4Q9GZR5 314 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 WNT8AQ9H1J5 351 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 CARD9Q9H257 536 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 VPS37BQ9H9H4 285 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 UVRAGQ9P2Y5 699 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 DIS3Q9Y2L1 958 aaKnown RBP9.54□□□□□ -0.88
COPB2-201ENST00000333188 COQ4Q9Y3A0 265 aa9.54□□□□□ -0.88
COPB2-201ENST00000333188 CITO14578 2027 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 MIF4GDA9UHW6 222 aaKnown RBP9.53□□□□□ -0.88
COPB2-201ENST00000333188 MAP2K7O14733 419 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 CST8O60676 142 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 RPS6KA5O75582 802 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 SYF2O95926 243 aaKnown RBP9.53□□□□□ -0.88
COPB2-201ENST00000333188 GAS8O95995 478 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 ACO1P21399 889 aaKnown RBP9.53□□□□□ -0.88
COPB2-201ENST00000333188 MLH1P40692 756 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 PSEN2P49810 448 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 CDH6P55285 790 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 MAGOHP61326 146 aaKnown RBP9.53□□□□□ -0.88
COPB2-201ENST00000333188 PRKCZQ05513 592 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 MCL1Q07820 350 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 GPS1Q13098 491 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 LONRF1Q17RB8 773 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 FAM117BQ6P1L5 589 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 EMBQ6PCB8 327 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 CEP57Q86XR8 500 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 RHOT1Q8IXI2 618 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 CCDC89Q8N998 374 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 FAM71BQ8TC56 605 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 RNF34Q969K3 372 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 ERP44Q9BS26 406 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 DDX23Q9BUQ8 820 aaKnown RBP9.53□□□□□ -0.88
COPB2-201ENST00000333188 FZD8Q9H461 694 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 LRRC4CQ9HCJ2 640 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 KAT6AQ92794 2004 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 FER1L6Q2WGJ9 1857 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 C17orf102A2RUQ5 167 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 DCDC2CA8MYV0 355 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 CCDC188H7C350 402 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 MICAL2O94851 1124 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 SHBGP04278 402 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 CCT5P48643 541 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 SLC26A2P50443 739 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 ZSCAN26Q16670 478 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 RNF187Q5TA31 235 aaPredicted RBP9.53□□□□□ -0.88
COPB2-201ENST00000333188 DSTYKQ6XUX3 929 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 TSHZ1Q6ZSZ6 1077 aa9.53□□□□□ -0.88
COPB2-201ENST00000333188 BCAS4Q8TDM0 211 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms