RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 RARAP10276 462 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 CYBAP13498 195 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 CTGFP29279 349 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 GBP1P32455 592 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 COILP38432 576 aaPredicted RBP14.8□□□□□ -0.04
TRAIP-201ENST00000331456 GGCXP38435 758 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 PIGHQ14442 188 aaPredicted RBP14.8□□□□□ -0.04
TRAIP-201ENST00000331456 STILQ15468 1287 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 CNGA2Q16280 664 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 PAXIP1Q6ZW49 1069 aaPredicted RBP14.8□□□□□ -0.04
TRAIP-201ENST00000331456 DDX42Q86XP3 938 aaKnown RBP eCLIP14.8□□□□□ -0.04
TRAIP-201ENST00000331456 CCDC50Q8IVM0 306 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 CCDC105Q8IYK2 499 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 TMEM130Q8N3G9 435 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 LRRC52Q8N7C0 313 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 TRPV1Q8NER1 839 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 C18orf8Q96DM3 657 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 TWNKQ96RR1 684 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 TRIM51Q9BSJ1 452 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 APOL6Q9BWW8 343 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 NT5C1AQ9BXI3 368 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 DPH5Q9H2P9 285 aa14.8□□□□□ -0.04
TRAIP-201ENST00000331456 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.8□□□□□ -0.04
TRAIP-201ENST00000331456 M0QYV0 167 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 RECQL4O94761 1208 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 MICAL2O94851 1124 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 GJB6O95452 261 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 CD4P01730 458 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 NDST1P52848 882 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 RPL7AP62424 266 aaKnown RBP14.79□□□□□ -0.04
TRAIP-201ENST00000331456 ORC1Q13415 861 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 TERF2Q15554 542 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 ZBTB6Q15916 424 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 PPP1R15BQ5SWA1 713 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 CFAP58Q5T655 872 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 CYP4A22Q5TCH4 519 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 DUPD1Q68J44 220 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 ALKAL1Q6UXT8 129 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 RSPH3Q86UC2 560 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 TSEN2Q8NCE0 465 aaKnown RBP14.79□□□□□ -0.04
TRAIP-201ENST00000331456 EXD1Q8NHP7 514 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 MIS12Q9H081 205 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 NXF3Q9H4D5 531 aaKnown RBP14.79□□□□□ -0.04
TRAIP-201ENST00000331456 LRRC19Q9H756 370 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 HOMER3Q9NSC5 361 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 VPS18Q9P253 973 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 HMGXB4Q9UGU5 601 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 HES2Q9Y543 173 aa14.79□□□□□ -0.04
TRAIP-201ENST00000331456 SIGLEC16A6NMB1 481 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 ECHS1P30084 290 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 HSPA9P38646 679 aaKnown RBP14.78□□□□□ -0.04
TRAIP-201ENST00000331456 PTGIRP43119 386 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 DRG2P55039 364 aaKnown RBP14.78□□□□□ -0.04
TRAIP-201ENST00000331456 GSCP56915 257 aaPredicted RBP14.78□□□□□ -0.04
TRAIP-201ENST00000331456 PSMC1P62191 440 aaKnown RBP14.78□□□□□ -0.04
TRAIP-201ENST00000331456 ZNF268Q14587 947 aaPredicted RBP14.78□□□□□ -0.04
TRAIP-201ENST00000331456 PTPN20Q4JDL3 420 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 LRRC38Q5VT99 294 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 TMEM40Q8WWA1 233 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 RBM41Q96IZ5 413 aaKnown RBP14.78□□□□□ -0.04
TRAIP-201ENST00000331456 ZMAT2Q96NC0 199 aaKnown RBP14.78□□□□□ -0.04
TRAIP-201ENST00000331456 PARP2Q9UGN5 583 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 TCRBV7S2A1N4TA0A589 114 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 TMEM88BA6NKF7 163 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 O00370 1275 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 SYF2O95926 243 aaKnown RBP14.78□□□□□ -0.04
TRAIP-201ENST00000331456 KRT3P12035 628 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 GJC1P36383 396 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 TAS2R40P59535 323 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 SIX1Q15475 284 aaPredicted RBP14.78□□□□□ -0.04
TRAIP-201ENST00000331456 ODF2Q5BJF6 829 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 RCOR2Q8IZ40 523 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 ZDHHC14Q8IZN3 488 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 NIPA2Q8N8Q9 360 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 IPO4Q8TEX9 1081 aaKnown RBP14.78□□□□□ -0.04
TRAIP-201ENST00000331456 TRIB2Q92519 343 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 TRIM31Q9BZY9 425 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 DNAI2Q9GZS0 605 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 UPF3AQ9H1J1 476 aaKnown RBP14.78□□□□□ -0.04
TRAIP-201ENST00000331456 TUBGCP4Q9UGJ1 667 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 FAN1Q9Y2M0 1017 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 SNX9Q9Y5X1 595 aa14.78□□□□□ -0.04
TRAIP-201ENST00000331456 MYADML2A6NDP7 307 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 GOLGA8SH3BPF8 625 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 AGPSO00116 658 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 RNF40O75150 1001 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 RARBP10826 455 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 AKAP5P24588 427 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 FLT3LGP49771 235 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 MRPS6P82932 125 aaKnown RBP14.77□□□□□ -0.04
TRAIP-201ENST00000331456 MTMR3Q13615 1198 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 ZFYVE27Q5T4F4 411 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 TTC27Q6P3X3 843 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 SMC1BQ8NDV3 1235 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 ZBTB9Q96C00 473 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 ZNF560Q96MR9 790 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 ARHGAP39Q9C0H5 1083 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 DDX56Q9NY93 547 aaKnown RBP14.77□□□□□ -0.04
TRAIP-201ENST00000331456 GTF2IRD1Q9UHL9 959 aa14.77□□□□□ -0.04
TRAIP-201ENST00000331456 FEZ2Q9UHY8 353 aaPredicted RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms