RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 A0A1W2PQ45 241 aaPredicted RBP16.82■□□□□ 0.28
PDGFB-201ENST00000331163 A0A1W2PQY0 241 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 SCAMP3O14828 347 aaKnown RBP16.82■□□□□ 0.28
PDGFB-201ENST00000331163 TADA2AO75478 443 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 C4BPAP04003 597 aaKnown RBP16.82■□□□□ 0.28
PDGFB-201ENST00000331163 RAG1P15918 1043 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 TBXAS1P24557 533 aaPredicted RBP16.82■□□□□ 0.28
PDGFB-201ENST00000331163 IGFBP6P24592 240 aaPredicted RBP16.82■□□□□ 0.28
PDGFB-201ENST00000331163 CRYBB1P53674 252 aaPredicted RBP16.82■□□□□ 0.28
PDGFB-201ENST00000331163 MCL1Q07820 350 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 FBXO47Q5MNV8 452 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 WSCD1Q658N2 575 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 SH2D3CQ8N5H7 860 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 TMEM35BQ8NCS4 154 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 UHMK1Q8TAS1 419 aaKnown RBP16.82■□□□□ 0.28
PDGFB-201ENST00000331163 DIS3LQ8TF46 1054 aaKnown RBP16.82■□□□□ 0.28
PDGFB-201ENST00000331163 SMIM23A6NLE4 172 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 KRIT1O00522 736 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 NAB2Q15742 525 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 GPR152Q8TDT2 470 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 CAPS2Q9BXY5 557 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 LRRC4Q9HBW1 653 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 DNAJC17Q9NVM6 304 aaKnown RBP16.82■□□□□ 0.28
PDGFB-201ENST00000331163 A0A1B0GUA9 196 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 SGO2Q562F6 1265 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 MRRFQ96E11 262 aaKnown RBP16.82■□□□□ 0.28
PDGFB-201ENST00000331163 HIPK3Q9H422 1215 aa16.82■□□□□ 0.28
PDGFB-201ENST00000331163 LRRD1A4D1F6 860 aa16.81■□□□□ 0.28
PDGFB-201ENST00000331163 F8W810 466 aa16.81■□□□□ 0.28
PDGFB-201ENST00000331163 IL18RAPO95256 599 aa16.81■□□□□ 0.28
PDGFB-201ENST00000331163 OR4Q2P0C623 313 aa16.81■□□□□ 0.28
PDGFB-201ENST00000331163 ARHGAP25P42331 645 aa16.81■□□□□ 0.28
PDGFB-201ENST00000331163 YWHAEP62258 255 aaKnown RBP16.81■□□□□ 0.28
PDGFB-201ENST00000331163 SDHAF4Q5VUM1 108 aa16.81■□□□□ 0.28
PDGFB-201ENST00000331163 TJP2Q9UDY2 1190 aa16.81■□□□□ 0.28
PDGFB-201ENST00000331163 CASP8AP2Q9UKL3 1982 aa16.81■□□□□ 0.28
PDGFB-201ENST00000331163 SSU72P8A0A1W2PR75 194 aa16.81■□□□□ 0.28
PDGFB-201ENST00000331163 FGGP02679 453 aa16.81■□□□□ 0.28
PDGFB-201ENST00000331163 SCUBE3Q8IX30 993 aa16.81■□□□□ 0.28
PDGFB-201ENST00000331163 MSL3Q8N5Y2 521 aaKnown RBP16.81■□□□□ 0.28
PDGFB-201ENST00000331163 SLAIN1Q8ND83 568 aa16.81■□□□□ 0.28
PDGFB-201ENST00000331163 MRPL45Q9BRJ2 306 aaKnown RBP16.81■□□□□ 0.28
PDGFB-201ENST00000331163 NT5C1AQ9BXI3 368 aa16.81■□□□□ 0.28
PDGFB-201ENST00000331163 ST6GALNAC4Q9H4F1 302 aa16.81■□□□□ 0.28
PDGFB-201ENST00000331163 ABI2Q9NYB9 513 aaPredicted RBP16.81■□□□□ 0.28
PDGFB-201ENST00000331163 TBKBP1A7MCY6 615 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 CHRNA1P02708 482 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 CLCNKBP51801 687 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 GJA9P57773 515 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 NME3Q13232 169 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 GOLGA7BQ2TAP0 167 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 FIGNQ5HY92 759 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 NACA2Q9H009 215 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 RSAD1Q9HA92 442 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 UBQLN1Q9UMX0 589 aaKnown RBP16.8■□□□□ 0.28
PDGFB-201ENST00000331163 CPB1P15086 417 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 HOXA11P31270 313 aaPredicted RBP16.8■□□□□ 0.28
PDGFB-201ENST00000331163 IRAK1P51617 712 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 CCDC91Q7Z6B0 441 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 CTU1Q7Z7A3 348 aaKnown RBP16.8■□□□□ 0.28
PDGFB-201ENST00000331163 OTUD6BQ8N6M0 293 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 BORCS6Q96GS4 357 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 DDX47Q9H0S4 455 aaKnown RBP16.8■□□□□ 0.28
PDGFB-201ENST00000331163 TSPYL2Q9H2G4 693 aaPredicted RBP16.8■□□□□ 0.28
PDGFB-201ENST00000331163 AIPL1Q9NZN9 384 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 PSMA2P25787 234 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 LMO2P25791 158 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 MARSP56192 900 aaKnown RBP16.8■□□□□ 0.28
PDGFB-201ENST00000331163 DCAF4L1Q3SXM0 396 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 SEL1L2Q5TEA6 688 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 C8orf74Q6P047 294 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 CAPN12Q6ZSI9 719 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 NETO2Q8NC67 525 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 ADAM32Q8TC27 787 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 HDAC7Q8WUI4 952 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 TWNKQ96RR1 684 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 HCSTQ9UBK5 93 aa16.8■□□□□ 0.28
PDGFB-201ENST00000331163 DICER1Q9UPY3 1922 aaKnown RBP16.79■□□□□ 0.28
PDGFB-201ENST00000331163 TAF6P49848 677 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 MEA1Q16626 185 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 CCDC105Q8IYK2 499 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 LRRN4Q8WUT4 740 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 DPEP3Q9H4B8 488 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 PCDHB7Q9Y5E2 793 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 CNTNAP2Q9UHC6 1331 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 KNL1Q8NG31 2342 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 KPNA7A9QM74 516 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 CDR2Q01850 454 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 DENND1BQ6P3S1 775 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.79■□□□□ 0.28
PDGFB-201ENST00000331163 TRIOBPQ9H2D6 2365 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 TRIP12Q14669 1992 aaPredicted RBP16.79■□□□□ 0.28
PDGFB-201ENST00000331163 IGKV6-21A0A0C4DH24 114 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 KIAA0391O15091 583 aaKnown RBP16.79■□□□□ 0.28
PDGFB-201ENST00000331163 COMTP21964 271 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 CETN2P41208 172 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 MYBPC2Q14324 1141 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 SMAD1Q15797 465 aaKnown RBP16.79■□□□□ 0.28
PDGFB-201ENST00000331163 MDH1BQ5I0G3 518 aa16.79■□□□□ 0.28
PDGFB-201ENST00000331163 UBL4BQ8N7F7 174 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms