RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 VCX3BQ9H321 246 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 OCEL1Q9H607 264 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 TUFT1Q9NNX1 390 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 VCX3AQ9NNX9 186 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 SSU72Q9NP77 194 aaKnown RBP19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 TAS2R1Q9NYW7 299 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 PSMC3IPQ9P2W1 217 aaPredicted RBP19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 SLC4A7Q9Y6M7 1214 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 WDR91A4D1P6 747 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 A8MXQ7 604 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 PYGBP11216 843 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 KRT4P19013 534 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 PIK3CAP42336 1068 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 HP1BP3Q5SSJ5 553 aaPredicted RBP19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 GSTA5Q7RTV2 222 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 PPM1KQ8N3J5 372 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 SHC3Q92529 594 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 OPTNQ96CV9 577 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 AMNQ9BXJ7 453 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 ZWILCHQ9H900 591 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 ANGPTL2Q9UKU9 493 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 SBF1O95248 1867 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 SLITRK3O94933 977 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 FDX1P10109 184 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 AMPD1P23109 780 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 SERPINB3P29508 390 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 CIITAP33076 1130 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 SLC1A1P43005 524 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 STAT2P52630 851 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 ANGEL2Q5VTE6 544 aaKnown RBP19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 ZNF276Q8N554 614 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 TUBGCP5Q96RT8 1024 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 STRA6Q9BX79 667 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 TRIM55Q9BYV6 548 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 FBXO6Q9NRD1 293 aaPredicted RBP19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 SLC24A2Q9UI40 661 aa19.07■□□□□ 0.64
CLSTN3-202ENST00000331148 TISP43B9A030 160 aa19.06■□□□□ 0.64
CLSTN3-202ENST00000331148 LGR5O75473 907 aa19.06■□□□□ 0.64
CLSTN3-202ENST00000331148 MXI1P50539 228 aa19.06■□□□□ 0.64
CLSTN3-202ENST00000331148 RTP1P59025 263 aa19.06■□□□□ 0.64
CLSTN3-202ENST00000331148 CDK16Q00536 496 aa19.06■□□□□ 0.64
CLSTN3-202ENST00000331148 KRT72Q14CN4 511 aa19.06■□□□□ 0.64
CLSTN3-202ENST00000331148 SLC30A10Q6XR72 485 aa19.06■□□□□ 0.64
CLSTN3-202ENST00000331148 APOBEC3FQ8IUX4 373 aaKnown RBP19.06■□□□□ 0.64
CLSTN3-202ENST00000331148 TRPM4Q8TD43 1214 aa19.06■□□□□ 0.64
CLSTN3-202ENST00000331148 PLEKHO2Q8TD55 490 aa19.06■□□□□ 0.64
CLSTN3-202ENST00000331148 PRR12Q9ULL5 1215 aa19.06■□□□□ 0.64
CLSTN3-202ENST00000331148 DNALI1O14645 258 aaPredicted RBP19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 CHMP2AO43633 222 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 RARBP10826 455 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 ARFIP2P53365 341 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 RASA2Q15283 850 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 NBPF12Q5TAG4 269 aaPredicted RBP19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 CCDC62Q6P9F0 684 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 IZUMO2Q6UXV1 221 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 FBXO11Q86XK2 927 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 OSBPL8Q9BZF1 889 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 PPCSQ9HAB8 311 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 GINM1Q9NU53 330 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 ZBED4O75132 1171 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 ESRRAP11474 423 aaPredicted RBP19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 PGM1P36871 562 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 MFAP3P55082 362 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 SNAP25P60880 206 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 DSG1Q02413 1049 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 ZBTB16Q05516 673 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 ZYXQ15942 572 aaKnown RBP19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 CCDC142Q17RM4 750 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 CLEC16AQ2KHT3 1053 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 PABPC1LQ4VXU2 614 aaKnown RBP19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 DDX1Q92499 740 aaKnown RBP19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 TMEM120AQ9BXJ8 343 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 GLIS2Q9BZE0 524 aaPredicted RBP19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 TMEM117Q9H0C3 514 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 PHF24Q9UPV7 400 aa19.05■□□□□ 0.64
CLSTN3-202ENST00000331148 GRIN3BO60391 1043 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 CDK7P50613 346 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 RAP1GDS1P52306 607 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 PPP2R5CQ13362 524 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 SEPT7Q16181 437 aaKnown RBP19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 LIN52Q52LA3 116 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 DCAF15Q66K64 600 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 ARHGAP24Q8N264 748 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 GLIS1Q8NBF1 620 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 CHURC1Q8WUH1 139 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 IWS1Q96ST2 819 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 CENPKQ9BS16 269 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 ATXN10Q9UBB4 475 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 MTO1Q9Y2Z2 717 aaKnown RBP19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 SH3BP1Q9Y3L3 701 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 UTRNP46939 3433 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 FOSP01100 380 aaPredicted RBP19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 ZNF76P36508 570 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 PTP4A2Q12974 167 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 HAPLN3Q96S86 360 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 ECSITQ9BQ95 431 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 CBWD1Q9BRT8 395 aa19.04■□□□□ 0.64
CLSTN3-202ENST00000331148 MANSC1Q9H8J5 431 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms