RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 CHADO15335 359 aa19.5■□□□□ 0.71
RAB28-202ENST00000330852 ITGB3P05106 788 aa19.5■□□□□ 0.71
RAB28-202ENST00000330852 HSP90AA1P07900 732 aaKnown RBP19.5■□□□□ 0.71
RAB28-202ENST00000330852 HAPLN1P10915 354 aaPredicted RBP19.5■□□□□ 0.71
RAB28-202ENST00000330852 CD72P21854 359 aa19.5■□□□□ 0.71
RAB28-202ENST00000330852 GABRR2P28476 465 aa19.5■□□□□ 0.71
RAB28-202ENST00000330852 SNRPFP62306 86 aaKnown RBP19.5■□□□□ 0.71
RAB28-202ENST00000330852 FCHO2Q0JRZ9 810 aa19.5■□□□□ 0.71
RAB28-202ENST00000330852 TAF12Q16514 161 aa19.5■□□□□ 0.71
RAB28-202ENST00000330852 MAMSTRQ6ZN01 415 aa19.5■□□□□ 0.71
RAB28-202ENST00000330852 TTC9BQ8N6N2 239 aa19.5■□□□□ 0.71
RAB28-202ENST00000330852 LEO1Q8WVC0 666 aaPredicted RBP19.5■□□□□ 0.71
RAB28-202ENST00000330852 GCNAQ96QF7 691 aa19.5■□□□□ 0.71
RAB28-202ENST00000330852 SEPT5Q99719 369 aaPredicted RBP19.5■□□□□ 0.71
RAB28-202ENST00000330852 ACBD6Q9BR61 282 aa19.5■□□□□ 0.71
RAB28-202ENST00000330852 FGFBP2Q9BYJ0 223 aa19.5■□□□□ 0.71
RAB28-202ENST00000330852 R3HCC1Q9Y3T6 440 aaKnown RBP19.5■□□□□ 0.71
RAB28-202ENST00000330852 PCDHB5Q9Y5E4 795 aa19.5■□□□□ 0.71
RAB28-202ENST00000330852 ZNF233A6NK53 670 aa19.49■□□□□ 0.71
RAB28-202ENST00000330852 SOBPA7XYQ1 873 aa19.49■□□□□ 0.71
RAB28-202ENST00000330852 ZSCAN22P10073 491 aaPredicted RBP19.49■□□□□ 0.71
RAB28-202ENST00000330852 LRRTM3Q86VH5 581 aa19.49■□□□□ 0.71
RAB28-202ENST00000330852 ARID3BQ8IVW6 561 aaPredicted RBP19.49■□□□□ 0.71
RAB28-202ENST00000330852 MAML2Q8IZL2 1156 aaPredicted RBP19.49■□□□□ 0.71
RAB28-202ENST00000330852 ADSSL1Q8N142 457 aa19.49■□□□□ 0.71
RAB28-202ENST00000330852 CSGALNACT2Q8N6G5 542 aa19.49■□□□□ 0.71
RAB28-202ENST00000330852 C7orf25Q9BPX7 421 aa19.49■□□□□ 0.71
RAB28-202ENST00000330852 TASP1Q9H6P5 420 aa19.49■□□□□ 0.71
RAB28-202ENST00000330852 COL4A3Q01955 1670 aa19.49■□□□□ 0.71
RAB28-202ENST00000330852 GOLGA8IPA6NC78 632 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 SHISA7A6NL88 538 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 GOLGA8JA6NMD2 632 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 TMEM191BP0C7N4 346 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 ATF6P18850 670 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 WNT7BP56706 349 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 ASIC1P78348 528 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 MYL7Q01449 175 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 SHC4Q6S5L8 630 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 DPH6Q7L8W6 267 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 PDCL2Q8N4E4 241 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 ZSWIM2Q8NEG5 633 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 CXorf38Q8TB03 319 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 ZNF507Q8TCN5 953 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 CSGALNACT1Q8TDX6 532 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 DHX58Q96C10 678 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 ANKRD36BP1Q96IX9 119 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 MKNK1Q9BUB5 465 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 PCIF1Q9H4Z3 704 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 C8orf33Q9H7E9 229 aaPredicted RBP19.48■□□□□ 0.71
RAB28-202ENST00000330852 PDE11AQ9HCR9 933 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 ABCB6Q9NP58 842 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 CFAP45Q9UL16 551 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 MYO15AQ9UKN7 3530 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 UBE4BO95155 1302 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 ARNTLO00327 626 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 DPYSL4O14531 572 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 SOAT2O75908 522 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 LHX1P48742 406 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 MYO1EQ12965 1108 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 FZD5Q13467 585 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 ARHGAP29Q52LW3 1261 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 GPR158Q5T848 1215 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 ZNF687Q8N1G0 1237 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 TOP6BLQ8N6T0 577 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 FAM3CQ92520 227 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 INTS13Q9NVM9 706 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 ABI2Q9NYB9 513 aaPredicted RBP19.48■□□□□ 0.71
RAB28-202ENST00000330852 FAM13BQ9NYF5 915 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 PIAS3Q9Y6X2 628 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 R4GN57 208 aa19.48■□□□□ 0.71
RAB28-202ENST00000330852 CFAP54Q96N23 3096 aa19.47■□□□□ 0.71
RAB28-202ENST00000330852 GVINP1Q7Z2Y8 2422 aa19.47■□□□□ 0.71
RAB28-202ENST00000330852 F13A1P00488 732 aa19.47■□□□□ 0.71
RAB28-202ENST00000330852 DDX6P26196 483 aaKnown RBP eCLIP19.47■□□□□ 0.718e-8■■□□□ 14.5
RAB28-202ENST00000330852 PCSK1P29120 753 aa19.47■□□□□ 0.71
RAB28-202ENST00000330852 BFSP1Q12934 665 aa19.47■□□□□ 0.71
RAB28-202ENST00000330852 DUOXA2Q1HG44 320 aa19.47■□□□□ 0.71
RAB28-202ENST00000330852 FAM26FQ5R3K3 315 aa19.47■□□□□ 0.71
RAB28-202ENST00000330852 EPM2AIP1Q7L775 607 aaPredicted RBP19.47■□□□□ 0.71
RAB28-202ENST00000330852 LPIN3Q9BQK8 851 aa19.47■□□□□ 0.71
RAB28-202ENST00000330852 FAM126AQ9BYI3 521 aaPredicted RBP19.47■□□□□ 0.71
RAB28-202ENST00000330852 IL21Q9HBE4 155 aa19.47■□□□□ 0.71
RAB28-202ENST00000330852 L1RE1Q9UN81 338 aa19.47■□□□□ 0.71
RAB28-202ENST00000330852 PCDHGA2Q9Y5H1 932 aa19.47■□□□□ 0.71
RAB28-202ENST00000330852 EP300Q09472 2414 aaPredicted RBP19.47■□□□□ 0.71
RAB28-202ENST00000330852 TNNC2P02585 160 aa19.46■□□□□ 0.71
RAB28-202ENST00000330852 RPL10AP62906 217 aaKnown RBP19.46■□□□□ 0.71
RAB28-202ENST00000330852 PLCB2Q00722 1185 aa19.46■□□□□ 0.71
RAB28-202ENST00000330852 UNC13DQ70J99 1090 aa19.46■□□□□ 0.71
RAB28-202ENST00000330852 NOC3LQ8WTT2 800 aaKnown RBP19.46■□□□□ 0.71
RAB28-202ENST00000330852 CHRDQ9H2X0 955 aa19.46■□□□□ 0.71
RAB28-202ENST00000330852 DDX43Q9NXZ2 648 aaKnown RBP19.46■□□□□ 0.71
RAB28-202ENST00000330852 HSPBP1Q9NZL4 362 aa19.46■□□□□ 0.71
RAB28-202ENST00000330852 CGNQ9P2M7 1197 aaKnown RBP19.46■□□□□ 0.71
RAB28-202ENST00000330852 SIX4Q9UIU6 781 aa19.46■□□□□ 0.71
RAB28-202ENST00000330852 OBSL1O75147 1896 aa19.46■□□□□ 0.71
RAB28-202ENST00000330852 TULP1O00294 542 aaPredicted RBP19.45■□□□□ 0.7
RAB28-202ENST00000330852 GABRDO14764 452 aa19.45■□□□□ 0.7
RAB28-202ENST00000330852 POLR2DO15514 142 aaKnown RBP19.45■□□□□ 0.7
RAB28-202ENST00000330852 KINO60870 393 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms