RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 FBXO2Q9UK22 296 aaPredicted RBP6.91□□□□□ -1.3
SMG1-201ENST00000330588 MTMR6Q9Y217 621 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 MTCL1Q9Y4B5 1905 aaKnown RBP6.91□□□□□ -1.3
SMG1-201ENST00000330588 SCO2A0A1W2PP80 73 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 SLC16A4O15374 487 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 XPOTO43592 962 aaKnown RBP6.91□□□□□ -1.3
SMG1-201ENST00000330588 TADA2AO75478 443 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 CLTAP09496 248 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 HNRNPA1P09651 372 aaKnown RBP eCLIP6.91□□□□□ -1.3
SMG1-201ENST00000330588 NPR3P17342 541 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 GAP43P17677 238 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 PLCG1P19174 1290 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 NFKB1P19838 968 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 GTF2BQ00403 316 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 CLUL1Q15846 466 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 UPP1Q16831 310 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 UVSSAQ2YD98 709 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 LONRF3Q496Y0 759 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 CNNM4Q6P4Q7 775 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 LILRA6Q6PI73 481 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 CCDC73Q6ZRK6 1079 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 HAUS6Q7Z4H7 955 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 GPBP1Q86WP2 473 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 MAP4K3Q8IVH8 894 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 UBALD2Q8IYN6 164 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 DTWD1Q8N5C7 304 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 EDAQ92838 391 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 NXPE3Q969Y0 559 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 ZNF396Q96N95 335 aaPredicted RBP6.91□□□□□ -1.3
SMG1-201ENST00000330588 ACAP3Q96P50 834 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 REEP2Q9BRK0 252 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 LRFN3Q9BTN0 628 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 TTPALQ9BTX7 342 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 KIFC3Q9BVG8 833 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 APOL6Q9BWW8 343 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 GPR62Q9BZJ7 368 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 LRRC27Q9C0I9 530 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 EPHX3Q9H6B9 360 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 MAGEF1Q9HAY2 307 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 OLFML3Q9NRN5 406 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 FRRS1LQ9P0K9 344 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 PRG3Q9Y2Y8 225 aaPredicted RBP6.91□□□□□ -1.3
SMG1-201ENST00000330588 DERAQ9Y315 318 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 BACE2Q9Y5Z0 518 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 STYXL1Q9Y6J8 313 aa6.91□□□□□ -1.3
SMG1-201ENST00000330588 ZFP37Q9Y6Q3 630 aaPredicted RBP6.91□□□□□ -1.3
SMG1-201ENST00000330588 BRWD1Q9NSI6 2320 aa6.9□□□□□ -1.3
SMG1-201ENST00000330588 CITO14578 2027 aa6.9□□□□□ -1.3
SMG1-201ENST00000330588 PLXNA3P51805 1871 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 SMIM28A0A1B0GU29 152 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 TTC26A0AVF1 554 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 FRMD3A2A2Y4 597 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 SYN3O14994 580 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 OGTO15294 1046 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 TEX28O15482 410 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 CLDN3O15551 220 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 TBCAO75347 108 aaKnown RBP6.9□□□□□ -1.31
SMG1-201ENST00000330588 RGS9O75916 674 aaPredicted RBP6.9□□□□□ -1.31
SMG1-201ENST00000330588 FAM13AO94988 1023 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 KIF4AO95239 1232 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 EPCAMP16422 314 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 LRPAP1P30533 357 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 ZXDAP98168 799 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 RAB33AQ14088 237 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 KARSQ15046 597 aaKnown RBP6.9□□□□□ -1.31
SMG1-201ENST00000330588 POSTNQ15063 836 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 PCSK7Q16549 785 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 PTPN21Q16825 1174 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 TMCO4Q5TGY1 634 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 SLFN12LQ6IEE8 588 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 LLGL2Q6P1M3 1020 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 ANKS3Q6ZW76 656 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 OTOP3Q7RTS5 596 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 CDR2LQ86X02 465 aaPredicted RBP6.9□□□□□ -1.31
SMG1-201ENST00000330588 NT5DC4Q86YG4 428 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 GLYCTKQ8IVS8 523 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 HSCBQ8IWL3 235 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 ETFBKMTQ8IXQ9 262 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 DMRTC2Q8IXT2 367 aaPredicted RBP6.9□□□□□ -1.31
SMG1-201ENST00000330588 LINC00301Q8NCQ3 95 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 TTC9Q92623 222 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 STAMQ92783 540 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 FIZ1Q96SL8 496 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 PRRX2Q99811 253 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 PYM1Q9BRP8 204 aaKnown RBP6.9□□□□□ -1.31
SMG1-201ENST00000330588 TARS2Q9BW92 718 aaKnown RBP6.9□□□□□ -1.31
SMG1-201ENST00000330588 STRA6Q9BX79 667 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 POMKQ9H5K3 350 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 MTRRQ9UBK8 725 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 FBXW11Q9UKB1 542 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 TBX20Q9UMR3 447 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 CLIC4Q9Y696 253 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 CDH23Q9H251 3354 aa6.9□□□□□ -1.31
SMG1-201ENST00000330588 A0A0B4J269 797 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 ARHGEF37A1IGU5 675 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 H7C4K7 107 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 KIAA0391O15091 583 aaKnown RBP6.89□□□□□ -1.31
SMG1-201ENST00000330588 FAM189A1O60320 539 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 CSPG5O95196 566 aa6.89□□□□□ -1.31
SMG1-201ENST00000330588 SSBP05455 408 aaKnown RBP eCLIP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms