RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 FAM47CQ5HY64 1035 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 PPP1R15BQ5SWA1 713 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 CYP4A22Q5TCH4 519 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 REM2Q8IYK8 340 aaPredicted RBP15.82■□□□□ 0.12
TPM3-205ENST00000328159 PRELID2Q8N945 189 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 SMG8Q8ND04 991 aaKnown RBP15.82■□□□□ 0.12
TPM3-205ENST00000328159 C3orf20Q8ND61 904 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 CAVIN3Q969G5 261 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 DDX27Q96GQ7 796 aaKnown RBP15.82■□□□□ 0.12
TPM3-205ENST00000328159 NT5C1AQ9BXI3 368 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 ACBD3Q9H3P7 528 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.82■□□□□ 0.12
TPM3-205ENST00000328159 RNF186Q9NXI6 227 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 KLK14Q9P0G3 267 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 CYTH4Q9UIA0 394 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 KIAA1257Q9ULG3 409 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.82■□□□□ 0.12
TPM3-205ENST00000328159 IPPQ9Y573 584 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 O00370 1275 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 TTI1O43156 1089 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 PSTPIP1O43586 416 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 PHF2O75151 1096 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 CD4P01730 458 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 HMGCRP04035 888 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 PRKAR2AP13861 404 aaKnown RBP15.82■□□□□ 0.12
TPM3-205ENST00000328159 KCNE1P15382 129 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 ELNP15502 786 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 ATF7P17544 494 aaPredicted RBP15.82■□□□□ 0.12
TPM3-205ENST00000328159 TAS2R40P59535 323 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 NNTQ13423 1086 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 CUL1Q13616 776 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 TRADDQ15628 312 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 DEFB115Q30KQ5 88 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 DCUN1D2Q6PH85 259 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 SERINC5Q86VE9 423 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 RHOT1Q8IXI2 618 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 ZDHHC14Q8IZN3 488 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 EIF1ADQ8N9N8 165 aaKnown RBP15.82■□□□□ 0.12
TPM3-205ENST00000328159 MCEEQ96PE7 176 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 RNF19AQ9NV58 838 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 MTUS1Q9ULD2 1270 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 HPCAL4Q9UM19 191 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 USTQ9Y2C2 406 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 SNX9Q9Y5X1 595 aa15.82■□□□□ 0.12
TPM3-205ENST00000328159 TCRBV7S2A1N4TA0A589 114 aa15.81■□□□□ 0.12
TPM3-205ENST00000328159 M0QYV0 167 aa15.81■□□□□ 0.12
TPM3-205ENST00000328159 XPOTO43592 962 aaKnown RBP15.81■□□□□ 0.12
TPM3-205ENST00000328159 TOMM70O94826 608 aa15.81■□□□□ 0.12
TPM3-205ENST00000328159 ASGR1P07306 291 aa15.81■□□□□ 0.12
TPM3-205ENST00000328159 CHRNA3P32297 505 aa15.81■□□□□ 0.12
TPM3-205ENST00000328159 GPS2Q13227 327 aa15.81■□□□□ 0.12
TPM3-205ENST00000328159 DAB2IPQ5VWQ8 1189 aa15.81■□□□□ 0.12
TPM3-205ENST00000328159 TWF2Q6IBS0 349 aaKnown RBP15.81■□□□□ 0.12
TPM3-205ENST00000328159 KLHDC9Q8NEP7 349 aa15.81■□□□□ 0.12
TPM3-205ENST00000328159 WNT8BQ93098 351 aa15.81■□□□□ 0.12
TPM3-205ENST00000328159 MRPL45Q9BRJ2 306 aaKnown RBP15.81■□□□□ 0.12
TPM3-205ENST00000328159 PIRO00625 290 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 FSCN2O14926 492 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 RPS6KA5O75582 802 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 MYCNP04198 464 aaPredicted RBP15.8■□□□□ 0.12
TPM3-205ENST00000328159 DR1Q01658 176 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 ZNF252P-AS1Q0IIN9 211 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 DHX34Q14147 1143 aaKnown RBP15.8■□□□□ 0.12
TPM3-205ENST00000328159 SIX1Q15475 284 aaPredicted RBP15.8■□□□□ 0.12
TPM3-205ENST00000328159 KCNA10Q16322 511 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 LCLAT1Q6UWP7 414 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 DPH6Q7L8W6 267 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 SESTD1Q86VW0 696 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 KATNAL2Q8IYT4 538 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.8■□□□□ 0.121e-8■■■■■ 76.2
TPM3-205ENST00000328159 C18orf8Q96DM3 657 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 CPXM1Q96SM3 734 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 SENP6Q9GZR1 1112 aaPredicted RBP15.8■□□□□ 0.12
TPM3-205ENST00000328159 WDR35Q9P2L0 1181 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 FAM187AA6NFU0 413 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 GOLGA8SH3BPF8 625 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 CHRNA1P02708 482 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 CTSHP09668 335 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 RARAP10276 462 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 CYP3A5P20815 502 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 CST5P28325 142 aaPredicted RBP15.8■□□□□ 0.12
TPM3-205ENST00000328159 OAS2P29728 719 aaKnown RBP15.8■□□□□ 0.12
TPM3-205ENST00000328159 GPD2P43304 727 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 SSR1P43307 286 aaKnown RBP15.8■□□□□ 0.12
TPM3-205ENST00000328159 GSCP56915 257 aaPredicted RBP15.8■□□□□ 0.12
TPM3-205ENST00000328159 PSMC1P62191 440 aaKnown RBP15.8■□□□□ 0.12
TPM3-205ENST00000328159 OGDHQ02218 1023 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 CYP1B1Q16678 543 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 ARRDC4Q8NCT1 418 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 SEC14L1Q92503 715 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 MAGOHBQ96A72 148 aaKnown RBP15.8■□□□□ 0.12
TPM3-205ENST00000328159 SYNCQ9H7C4 482 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 ST7Q9NRC1 585 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 TJP2Q9UDY2 1190 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 ST3GAL5Q9UNP4 418 aa15.8■□□□□ 0.12
TPM3-205ENST00000328159 UTP11Q9Y3A2 253 aaKnown RBP15.8■□□□□ 0.12
TPM3-205ENST00000328159 SIGLEC16A6NMB1 481 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 H3BQF6 201 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 ERBB2P04626 1255 aa15.79■□□□□ 0.12
TPM3-205ENST00000328159 RPLP2P05387 115 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms