RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 DOCK3Q8IZD9 2030 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 NFASCO94856 1347 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 E2F8A0AVK6 867 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 HMGB1P1B2RPK0 211 aaPredicted RBP11.25□□□□□ -0.61
CUL4A-201ENST00000326335 BTBD19C9JJ37 291 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 H0YCG3 227 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 SOCS7O14512 581 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 F7P08709 466 aaPredicted RBP11.25□□□□□ -0.61
CUL4A-201ENST00000326335 IGFBP6P24592 240 aaPredicted RBP11.25□□□□□ -0.61
CUL4A-201ENST00000326335 ERFP50548 548 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 POU5F1Q01860 360 aaKnown RBP11.25□□□□□ -0.61
CUL4A-201ENST00000326335 KCTD17Q8N5Z5 321 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 FAM71DQ8N9W8 422 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 GPRC5AQ8NFJ5 357 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 OR6J1Q8NGC5 347 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 ARHGEF2Q92974 986 aaKnown RBP11.25□□□□□ -0.61
CUL4A-201ENST00000326335 VTI1AQ96AJ9 217 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 CFAP57Q96MR6 1250 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 RBM15Q96T37 977 aaKnown RBP eCLIP11.25□□□□□ -0.614e-9■■■■■ 33.8
CUL4A-201ENST00000326335 MPHOSPH6Q99547 160 aaKnown RBP11.25□□□□□ -0.61
CUL4A-201ENST00000326335 KIAA1586Q9HCI6 787 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 MRPL47Q9HD33 250 aaKnown RBP11.25□□□□□ -0.61
CUL4A-201ENST00000326335 ZDHHC18Q9NUE0 388 aa11.25□□□□□ -0.61
CUL4A-201ENST00000326335 CCDC78A2IDD5 438 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 ZBTB42B2RXF5 422 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 ASS1P00966 412 aaKnown RBP11.24□□□□□ -0.61
CUL4A-201ENST00000326335 RARBP10826 455 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 CETN2P41208 172 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 NDST1P52848 882 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 MTMR3Q13615 1198 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 PPP2R5DQ14738 602 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 FMNL3Q8IVF7 1028 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 CCDC89Q8N998 374 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 HASPINQ8TF76 798 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 DDX27Q96GQ7 796 aaKnown RBP11.24□□□□□ -0.61
CUL4A-201ENST00000326335 FGD4Q96M96 766 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 TRIM56Q9BRZ2 755 aaKnown RBP11.24□□□□□ -0.61
CUL4A-201ENST00000326335 EIF2AQ9BY44 585 aaKnown RBP11.24□□□□□ -0.61
CUL4A-201ENST00000326335 FEZ2Q9UHY8 353 aaPredicted RBP11.24□□□□□ -0.61
CUL4A-201ENST00000326335 ATAD5Q96QE3 1844 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 ITGBL1O95965 494 aaPredicted RBP11.24□□□□□ -0.61
CUL4A-201ENST00000326335 HOXC6P09630 235 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 CYP4X1Q8N118 509 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.24□□□□□ -0.61
CUL4A-201ENST00000326335 DNAJB3Q8WWF6 145 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 ADPGKQ9BRR6 497 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 DCLK3Q9C098 648 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 PIN4Q9Y237 131 aaKnown RBP11.24□□□□□ -0.61
CUL4A-201ENST00000326335 A0A0G2JLL6 359 aaPredicted RBP11.24□□□□□ -0.61
CUL4A-201ENST00000326335 H0YGN5 161 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 H7C0C1 242 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 RIPK2O43353 540 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 AVILO75366 819 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 MYL3P08590 195 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 IL1R2P27930 398 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 ATP5OP48047 213 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 GDF10P55107 478 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 DHX34Q14147 1143 aaKnown RBP11.24□□□□□ -0.61
CUL4A-201ENST00000326335 TFDP1Q14186 410 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 MXD4Q14582 209 aaPredicted RBP11.24□□□□□ -0.61
CUL4A-201ENST00000326335 EFTUD2Q15029 972 aaKnown RBP eCLIP11.24□□□□□ -0.612e-7■■■■■ 28.3
CUL4A-201ENST00000326335 CCL14Q16627 93 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 SGSM1Q2NKQ1 1148 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 ZNF618Q5T7W0 954 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 PRRT2Q7Z6L0 340 aaPredicted RBP11.24□□□□□ -0.61
CUL4A-201ENST00000326335 WDTC1Q8N5D0 677 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 ACTL9Q8TC94 416 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 CLEC4CQ8WTT0 213 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 RPS6KC1Q96S38 1066 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 SGIP1Q9BQI5 828 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 NXF3Q9H4D5 531 aaKnown RBP11.24□□□□□ -0.61
CUL4A-201ENST00000326335 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.24□□□□□ -0.61
CUL4A-201ENST00000326335 PSD3Q9NYI0 1048 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 TUBGCP4Q9UGJ1 667 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 NFS1Q9Y697 457 aa11.24□□□□□ -0.61
CUL4A-201ENST00000326335 E5RJQ4 531 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 RFC5P40937 340 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 CDH6P55285 790 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 IRX4P78413 519 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 SNAPC2Q13487 334 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 BYSLQ13895 437 aaKnown RBP11.23□□□□□ -0.61
CUL4A-201ENST00000326335 ADAM32Q8TC27 787 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 RSAD2Q8WXG1 361 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 TTLL3Q9Y4R7 772 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 ZNFX1Q9P2E3 1918 aaKnown RBP11.23□□□□□ -0.61
CUL4A-201ENST00000326335 FER1L6Q2WGJ9 1857 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 SPDYE5A6NIY4 337 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 ERBB2P04626 1255 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 EFNA5P52803 228 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 OTUD4Q01804 1114 aaKnown RBP11.23□□□□□ -0.61
CUL4A-201ENST00000326335 ZNF252P-AS1Q0IIN9 211 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 PDIA2Q13087 525 aaKnown RBP11.23□□□□□ -0.61
CUL4A-201ENST00000326335 SPRED3Q2MJR0 410 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 NUGGCQ68CJ6 796 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 HOOK3Q86VS8 718 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 SPOCK2Q92563 424 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 CD101Q93033 1021 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 ELOVL4Q9GZR5 314 aa11.23□□□□□ -0.61
CUL4A-201ENST00000326335 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.23□□□□□ -0.61
CUL4A-201ENST00000326335 SIX4Q9UIU6 781 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms