RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 NMT1P30419 496 aaKnown RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 ADARP55265 1226 aaKnown RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 FAM71DQ8N9W8 422 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 ACSF2Q96CM8 615 aaPredicted RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 CEP95Q96GE4 821 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 RPAP3Q9H6T3 665 aaPredicted RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 MANSC1Q9H8J5 431 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 ABCD1P33897 745 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 GPSM2P81274 684 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 SCARA3Q6AZY7 606 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 JAMLQ86YT9 394 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 SLC44A2Q8IWA5 706 aaPredicted RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 RAB42Q8N4Z0 105 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 ATL2Q8NHH9 583 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 SGSM3Q96HU1 749 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 PAIP1Q9H074 479 aaKnown RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 SLC39A10Q9ULF5 831 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 CCT3P49368 545 aaKnown RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 COX10Q12887 443 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 USP10Q14694 798 aaKnown RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 TMEM179Q6ZVK1 233 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 SPATA2LQ8IUW3 424 aaPredicted RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 MRPL4Q9BYD3 311 aaKnown RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 FEM1BQ9UK73 627 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 NCF1BA6NI72 391 aaPredicted RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 NCF1CA8MVU1 366 aaPredicted RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 FAM25AB3EWG3 89 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 FAM25CB3EWG5 89 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 FAM25GB3EWG6 89 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 TRIM24O15164 1050 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 NCF1P14598 390 aaPredicted RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 PSMC3P17980 439 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 ZNF618Q5T7W0 954 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 ADGRF4Q8IZF3 695 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 ZFYVE1Q9HBF4 777 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 DDX56Q9NY93 547 aaKnown RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 SPASTQ9UBP0 616 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 KIAA0556O60303 1618 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 C2CD2LO14523 706 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 TSPAN9O75954 239 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 COPAP53621 1224 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 PPIDQ08752 370 aaKnown RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 POLD3Q15054 466 aaPredicted RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 GALNTL6Q49A17 601 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 CYP4A22Q5TCH4 519 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 TRIQKQ629K1 86 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 CLEC4GQ6UXB4 293 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 RHOT1Q8IXI2 618 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 NEU2Q9Y3R4 380 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 RARBP10826 455 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 VEPH1Q14D04 833 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 MIEF2Q96C03 454 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 MAGEB10Q96LZ2 347 aaPredicted RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 H2AFY2Q9P0M6 372 aaPredicted RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 hCG_1984214I3L0E3 225 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 NPM3O75607 178 aaKnown RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 ZNF23P17027 643 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 KCNMA1Q12791 1236 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 HLFQ16534 295 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 SUSD4Q5VX71 490 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 ZNF713Q8N859 430 aaPredicted RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 EIF2AK1Q9BQI3 630 aaKnown RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 NDUFS3O75489 264 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 BBOX1O75936 387 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 RFC5P40937 340 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 TRIM71Q2Q1W2 868 aaKnown RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 ARMCX4Q5H9R4 360 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 PACS2Q86VP3 889 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 PCYOX1LQ8NBM8 494 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 FAM167AQ96KS9 214 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 PSMC3IPQ9P2W1 217 aaPredicted RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 ARHGEF17Q96PE2 2063 aaPredicted RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 SVILO95425 2214 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 PBLDP30039 288 aaPredicted RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 ACOT2P49753 483 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 AKR1D1P51857 326 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 ARMC4Q5T2S8 1044 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 ZBTB46Q86UZ6 589 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 MCPH1Q8NEM0 835 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 AGO2Q9UKV8 859 aaKnown RBP8.23□□□□□ -1.09
CIITA-201ENST00000324288 FHOD1Q9Y613 1164 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 CEP290O15078 2479 aa8.23□□□□□ -1.09
CIITA-201ENST00000324288 COMTP21964 271 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 CDC27P30260 824 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 BIVM-ERCC5R4GMW8 1640 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 TRIM49D1C9J1S8 452 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 PRRG1O14668 218 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 TBXAS1P24557 533 aaPredicted RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 C12orf60Q5U649 245 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 DGKHQ86XP1 1220 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 ZCCHC7Q8N3Z6 543 aaKnown RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 RNF149Q8NC42 400 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 FAM111AQ96PZ2 611 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 KLHL4Q9C0H6 718 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 POLR1BQ9H9Y6 1135 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 RGL1Q9NZL6 768 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 SERPINB8P50452 374 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 HPCAP84074 193 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 ZNF200P98182 395 aaPredicted RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 TTLL4Q14679 1199 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms