RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 MAGEA4P43358 317 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 CACNA2D1P54289 1103 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 BCAR1P56945 870 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 HIF1AQ16665 826 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 NLRP9Q7RTR0 991 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 CCDC125Q86Z20 511 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 RNF181Q9P0P0 153 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 COL20A1Q9P218 1284 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 STK10O94804 968 aaKnown RBP16.01■□□□□ 0.15
VARS2-201ENST00000321897 RBP3P10745 1247 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 ETS2P15036 469 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 VHLP40337 213 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 ARL4CP56559 192 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 SNX30Q5VWJ9 437 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 FBXO16Q8IX29 292 aaPredicted RBP16.01■□□□□ 0.15
VARS2-201ENST00000321897 NETO2Q8NC67 525 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 PPP4R1Q8TF05 950 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 SUPT3HO75486 399 aa16■□□□□ 0.15
VARS2-201ENST00000321897 SNHG28P0DPA3 235 aa16■□□□□ 0.15
VARS2-201ENST00000321897 NCALDP61601 193 aa16■□□□□ 0.15
VARS2-201ENST00000321897 CYTH1Q15438 398 aa16■□□□□ 0.15
VARS2-201ENST00000321897 PDCD2Q16342 344 aaPredicted RBP16■□□□□ 0.15
VARS2-201ENST00000321897 TRIML2Q8N7C3 387 aa16■□□□□ 0.15
VARS2-201ENST00000321897 SNX25Q9H3E2 840 aa16■□□□□ 0.15
VARS2-201ENST00000321897 LRRC4Q9HBW1 653 aa16■□□□□ 0.15
VARS2-201ENST00000321897 KLK14Q9P0G3 267 aa16■□□□□ 0.15
VARS2-201ENST00000321897 HEY2Q9UBP5 337 aa16■□□□□ 0.15
VARS2-201ENST00000321897 IP6K2Q9UHH9 426 aa16■□□□□ 0.15
VARS2-201ENST00000321897 VAV3Q9UKW4 847 aa16■□□□□ 0.15
VARS2-201ENST00000321897 ASAP2O43150 1006 aa16■□□□□ 0.15
VARS2-201ENST00000321897 PSEN1P49768 467 aa16■□□□□ 0.15
VARS2-201ENST00000321897 ARPP19P56211 112 aa16■□□□□ 0.15
VARS2-201ENST00000321897 XRCC4Q13426 336 aa16■□□□□ 0.15
VARS2-201ENST00000321897 STYK1Q6J9G0 422 aa16■□□□□ 0.15
VARS2-201ENST00000321897 DPY19L2Q6NUT2 758 aa16■□□□□ 0.15
VARS2-201ENST00000321897 C3orf62Q6ZUJ4 267 aa16■□□□□ 0.15
VARS2-201ENST00000321897 CCT6BQ92526 530 aa16■□□□□ 0.15
VARS2-201ENST00000321897 SEMA4DQ92854 862 aa16■□□□□ 0.15
VARS2-201ENST00000321897 GRAMD1AQ96CP6 724 aa16■□□□□ 0.15
VARS2-201ENST00000321897 P2RX7Q99572 595 aaKnown RBP16■□□□□ 0.15
VARS2-201ENST00000321897 SLCO1B3Q9NPD5 702 aa16■□□□□ 0.15
VARS2-201ENST00000321897 KCNN4O15554 427 aa16■□□□□ 0.15
VARS2-201ENST00000321897 ITGB3P05106 788 aa16■□□□□ 0.15
VARS2-201ENST00000321897 CUL2Q13617 745 aa16■□□□□ 0.15
VARS2-201ENST00000321897 SENP7Q9BQF6 1050 aa16■□□□□ 0.15
VARS2-201ENST00000321897 TRAIPQ9BWF2 469 aa16■□□□□ 0.15
VARS2-201ENST00000321897 MYLK2Q9H1R3 596 aa16■□□□□ 0.15
VARS2-201ENST00000321897 RXFP1Q9HBX9 757 aa16■□□□□ 0.15
VARS2-201ENST00000321897 KIF1AQ12756 1690 aa16■□□□□ 0.15
VARS2-201ENST00000321897 BANF1O75531 89 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 SPRED3Q2MJR0 410 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 ZCWPW2Q504Y3 356 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 TEX9Q8N6V9 391 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 TTC8Q8TAM2 541 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 SPATA18Q8TC71 538 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 SEPT1Q8WYJ6 367 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 SLC10A4Q96EP9 437 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 FAM81BQ96LP2 452 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 CHD2O14647 1828 aaKnown RBP15.99■□□□□ 0.15
VARS2-201ENST00000321897 LOC100653049A0A140TA62 436 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 COPEO14579 308 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 CCDC22O60826 627 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 KRT34O76011 436 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 BACE1P56817 501 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 PTENP60484 403 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 CYP24A1Q07973 514 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 TRIP10Q15642 601 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 HSP90AA5PQ58FG0 334 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 TRMT10CQ7L0Y3 403 aaKnown RBP15.99■□□□□ 0.15
VARS2-201ENST00000321897 CEP41Q9BYV8 373 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 VPS11Q9H270 941 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 KIAA1586Q9HCI6 787 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 ARFGEF2Q9Y6D5 1785 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 A8MXQ7 604 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 MED7O43513 233 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 LPXNO60711 386 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 GH1P01241 217 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 VTNP04004 478 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 CALB1P05937 261 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 RARBP10826 455 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 HNRNPH3P31942 346 aaKnown RBP15.99■□□□□ 0.15
VARS2-201ENST00000321897 AP2B1P63010 937 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 CACNB2Q08289 660 aaPredicted RBP15.99■□□□□ 0.15
VARS2-201ENST00000321897 RNF220Q5VTB9 566 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 EFCAB12Q6NXP0 572 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 CD302Q8IX05 232 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 MKL1Q969V6 931 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 MTBPQ96DY7 904 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 LZTS1Q9Y250 596 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 FRMPD4Q14CM0 1322 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 F8VP50 259 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 RIPK2O43353 540 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 CREB1P16220 341 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 ATP2A3Q93084 1043 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 PCDHB18PQ96TA0 734 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 SIK2Q9H0K1 926 aa15.99■□□□□ 0.15
VARS2-201ENST00000321897 ZWINTO95229 277 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 RARGP13631 454 aa15.98■□□□□ 0.15
VARS2-201ENST00000321897 HOXA7P31268 230 aaPredicted RBP15.98■□□□□ 0.15
VARS2-201ENST00000321897 SDC4P31431 198 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms