RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 STAM2O75886 525 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 ASS1P00966 412 aaKnown RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 EDN1P05305 212 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 ETS1P14921 441 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 ATF7P17544 494 aaPredicted RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 GBP2P32456 591 aaPredicted RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 SSTR3P32745 418 aaPredicted RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 CDH5P33151 784 aaPredicted RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 HSPA1LP34931 641 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 RPA3P35244 121 aaPredicted RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 CDKN2BP42772 138 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 OAZ1P54368 228 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 LACTBP83111 547 aaPredicted RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 TAP1Q03518 808 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 PDE4CQ08493 712 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 CRYMQ14894 314 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 MTERF2Q49AM1 385 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 TFDP3Q5H9I0 405 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 KAZNQ674X7 775 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 TXNRD3NBQ6F5E7 133 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 SPOCK2Q92563 424 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 MIEF2Q96C03 454 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 RSRC1Q96IZ7 334 aaKnown RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 TMEM237Q96Q45 408 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 RAB3IPQ96QF0 476 aaPredicted RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 SMC6Q96SB8 1091 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 ZNF518BQ9C0D4 1074 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 VPS33BQ9H267 617 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 KIF9Q9HAQ2 790 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 ETNK1Q9HBU6 452 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 SLCO1B3Q9NPD5 702 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 CYLDQ9NQC7 956 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 DDX56Q9NY93 547 aaKnown RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 PSMC3IPQ9P2W1 217 aaPredicted RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 ZNF214Q9UL59 606 aaPredicted RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 ADAMTS5Q9UNA0 930 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 FARP1Q9Y4F1 1045 aaPredicted RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 MAFBQ9Y5Q3 323 aaPredicted RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 CLUHO75153 1309 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 C3orf70A6NLC5 250 aaPredicted RBP9.17□□□□□ -0.94
CLK1-201ENST00000321356 POC1B-GALNT4F8VUJ3 575 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 K7ERI5 159 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 FAM189A1O60320 539 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 DCTN3O75935 186 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 AP3M2P53677 418 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 CLNS1AP54105 237 aaKnown RBP9.17□□□□□ -0.94
CLK1-201ENST00000321356 GPX6P59796 221 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 TGFB2P61812 414 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 GRM1Q13255 1194 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 PIGHQ14442 188 aaPredicted RBP9.17□□□□□ -0.94
CLK1-201ENST00000321356 SETDB1Q15047 1291 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 SLC1A5Q15758 541 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 TAZQ16635 292 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 SCARA3Q6AZY7 606 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 DNAJC24Q6P3W2 148 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 CENPUQ71F23 418 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 POLNQ7Z5Q5 900 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 ERICH1Q86X53 443 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 BRSK2Q8IWQ3 736 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 ZBED8Q8IZ13 594 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 AGGF1Q8N302 714 aaeCLIP9.17□□□□□ -0.94
CLK1-201ENST00000321356 TTLL6Q8N841 843 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 C10orf82Q8WW14 230 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 INPP5DQ92835 1189 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 TMEM143Q96AN5 459 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 ERP27Q96DN0 273 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 ZNF570Q96NI8 536 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 MCEEQ96PE7 176 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 PAIP2Q9BPZ3 127 aaKnown RBP9.17□□□□□ -0.94
CLK1-201ENST00000321356 DHRS4Q9BTZ2 278 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 TARS2Q9BW92 718 aaKnown RBP9.17□□□□□ -0.94
CLK1-201ENST00000321356 TMEM134Q9H6X4 195 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 VPS37BQ9H9H4 285 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 MYOZ2Q9NPC6 264 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 FBXO40Q9UH90 709 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 EFR3BQ9Y2G0 817 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 STK38LQ9Y2H1 464 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 SNCAIPQ9Y6H5 919 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 TRAFD1O14545 582 aaPredicted RBP9.17□□□□□ -0.94
CLK1-201ENST00000321356 ATG7O95352 703 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 OATP04181 439 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 RPSAP08865 295 aaKnown RBP9.17□□□□□ -0.94
CLK1-201ENST00000321356 T-ENOLP0DO92 83 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 FGFR1P11362 822 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 KRT15P19012 456 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 CA4P22748 312 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 ATP11AP98196 1134 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 SP4Q02446 784 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 CXCL9Q07325 125 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 PDIA2Q13087 525 aaKnown RBP9.17□□□□□ -0.94
CLK1-201ENST00000321356 HIF1AQ16665 826 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 SNRNP48Q6IEG0 339 aaKnown RBP9.17□□□□□ -0.94
CLK1-201ENST00000321356 C4orf33Q8N1A6 199 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 TMEM35BQ8NCS4 154 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 DEPTORQ8TB45 409 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 ZNF398Q8TD17 642 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 LRRC8CQ8TDW0 803 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 ZNF526Q8TF50 670 aaPredicted RBP9.17□□□□□ -0.94
CLK1-201ENST00000321356 MZB1Q8WU39 189 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 LRRC37BQ96QE4 947 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms