RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 DENND2CQ68D51 928 aa15.05■□□□□ 0
VRK3-201ENST00000316763 MICALCLQ6ZW33 695 aa15.05■□□□□ 0
VRK3-201ENST00000316763 PHF24Q9UPV7 400 aa15.05■□□□□ 0
VRK3-201ENST00000316763 TNFSF13BQ9Y275 285 aa15.05■□□□□ 0
VRK3-201ENST00000316763 C17orf102A2RUQ5 167 aa15.05■□□□□ -0
VRK3-201ENST00000316763 B4GALT5O43286 388 aa15.05■□□□□ -0
VRK3-201ENST00000316763 GPR32O75388 356 aa15.05■□□□□ -0
VRK3-201ENST00000316763 CABYRO75952 493 aa15.05■□□□□ -0
VRK3-201ENST00000316763 NUDT17P0C025 328 aa15.05■□□□□ -0
VRK3-201ENST00000316763 RARAP10276 462 aa15.05■□□□□ -0
VRK3-201ENST00000316763 GNAT1P11488 350 aa15.05■□□□□ -0
VRK3-201ENST00000316763 CYP2C9P11712 490 aa15.05■□□□□ -0
VRK3-201ENST00000316763 MAGEA9P43362 315 aa15.05■□□□□ -0
VRK3-201ENST00000316763 SLMAPQ14BN4 828 aa15.05■□□□□ -0
VRK3-201ENST00000316763 NBPF20Q3BBV1 942 aa15.05■□□□□ -0
VRK3-201ENST00000316763 ATF7IP2Q5U623 682 aa15.05■□□□□ -0
VRK3-201ENST00000316763 TTC27Q6P3X3 843 aa15.05■□□□□ -0
VRK3-201ENST00000316763 C7orf31Q8N865 590 aa15.05■□□□□ -0
VRK3-201ENST00000316763 FBXO25Q8TCJ0 367 aa15.05■□□□□ -0
VRK3-201ENST00000316763 NLRP7Q8WX94 980 aa15.05■□□□□ -0
VRK3-201ENST00000316763 RABEP2Q9H5N1 569 aa15.05■□□□□ -0
VRK3-201ENST00000316763 LRRC19Q9H756 370 aa15.05■□□□□ -0
VRK3-201ENST00000316763 RBAKQ9NYW8 714 aaPredicted RBP15.05■□□□□ -0
VRK3-201ENST00000316763 NOVA2Q9UNW9 492 aaKnown RBP15.05■□□□□ -0
VRK3-201ENST00000316763 A0A1W2PQ45 241 aaPredicted RBP15.04■□□□□ -0
VRK3-201ENST00000316763 A0A1W2PQY0 241 aa15.04■□□□□ -0
VRK3-201ENST00000316763 FSCN2O14926 492 aa15.04■□□□□ -0
VRK3-201ENST00000316763 TREHO43280 583 aa15.04■□□□□ -0
VRK3-201ENST00000316763 ECEL1O95672 775 aa15.04■□□□□ -0
VRK3-201ENST00000316763 TBXAS1P24557 533 aaPredicted RBP15.04■□□□□ -0
VRK3-201ENST00000316763 MAN1A1P33908 653 aa15.04■□□□□ -0
VRK3-201ENST00000316763 RPL21P46778 160 aaKnown RBP15.04■□□□□ -0
VRK3-201ENST00000316763 ACOT2P49753 483 aa15.04■□□□□ -0
VRK3-201ENST00000316763 ZBTB41Q5SVQ8 909 aa15.04■□□□□ -0
VRK3-201ENST00000316763 TDRD10Q5VZ19 366 aaKnown RBP15.04■□□□□ -0
VRK3-201ENST00000316763 MPZL3Q6UWV2 235 aa15.04■□□□□ -0
VRK3-201ENST00000316763 ZDHHC24Q6UX98 284 aa15.04■□□□□ -0
VRK3-201ENST00000316763 GLT1D1Q96MS3 346 aa15.04■□□□□ -0
VRK3-201ENST00000316763 PPP1R16BQ96T49 567 aa15.04■□□□□ -0
VRK3-201ENST00000316763 CGRRF1Q99675 332 aa15.04■□□□□ -0
VRK3-201ENST00000316763 CNOT10Q9H9A5 744 aaKnown RBP15.04■□□□□ -0
VRK3-201ENST00000316763 GRHL1Q9NZI5 618 aa15.04■□□□□ -0
VRK3-201ENST00000316763 CNTNAP2Q9UHC6 1331 aa15.04■□□□□ -0
VRK3-201ENST00000316763 OGTO15294 1046 aa15.04■□□□□ -0
VRK3-201ENST00000316763 ZNF200P98182 395 aaPredicted RBP15.04■□□□□ -0
VRK3-201ENST00000316763 CENPCQ03188 943 aa15.04■□□□□ -0
VRK3-201ENST00000316763 CUL2Q13617 745 aa15.04■□□□□ -0
VRK3-201ENST00000316763 PPP1R7Q15435 360 aa15.04■□□□□ -0
VRK3-201ENST00000316763 LMBRD2Q68DH5 695 aaPredicted RBP15.04■□□□□ -0
VRK3-201ENST00000316763 C3orf20Q8ND61 904 aa15.04■□□□□ -0
VRK3-201ENST00000316763 CPA5Q8WXQ8 436 aa15.04■□□□□ -0
VRK3-201ENST00000316763 ELMO3Q96BJ8 720 aa15.04■□□□□ -0
VRK3-201ENST00000316763 TCHPQ9BT92 498 aa15.04■□□□□ -0
VRK3-201ENST00000316763 FAM49AQ9H0Q0 323 aaPredicted RBP15.04■□□□□ -0
VRK3-201ENST00000316763 PCDHB4Q9Y5E5 795 aa15.04■□□□□ -0
VRK3-201ENST00000316763 FAM169AQ9Y6X4 670 aa15.04■□□□□ -0
VRK3-201ENST00000316763 TRIM66O15016 1216 aa15.03■□□□□ -0
VRK3-201ENST00000316763 CSDE1O75534 798 aaKnown RBP15.03■□□□□ -0
VRK3-201ENST00000316763 CYP1A1P04798 512 aaPredicted RBP15.03■□□□□ -0
VRK3-201ENST00000316763 AP3M2P53677 418 aa15.03■□□□□ -0
VRK3-201ENST00000316763 WNT7BP56706 349 aa15.03■□□□□ -0
VRK3-201ENST00000316763 MAGOHP61326 146 aaKnown RBP15.03■□□□□ -0
VRK3-201ENST00000316763 CALCOCO2Q13137 446 aa15.03■□□□□ -0
VRK3-201ENST00000316763 ITGA7Q13683 1181 aa15.03■□□□□ -0
VRK3-201ENST00000316763 BYSLQ13895 437 aaKnown RBP15.03■□□□□ -0
VRK3-201ENST00000316763 SIX1Q15475 284 aaPredicted RBP15.03■□□□□ -0
VRK3-201ENST00000316763 KIZQ2M2Z5 673 aa15.03■□□□□ -0
VRK3-201ENST00000316763 SGO2Q562F6 1265 aa15.03■□□□□ -0
VRK3-201ENST00000316763 SYDE1Q6ZW31 735 aaPredicted RBP15.03■□□□□ -0
VRK3-201ENST00000316763 NLRP14Q86W24 1093 aa15.03■□□□□ -0
VRK3-201ENST00000316763 ZDHHC14Q8IZN3 488 aa15.03■□□□□ -0
VRK3-201ENST00000316763 GRK7Q8WTQ7 553 aa15.03■□□□□ -0
VRK3-201ENST00000316763 PPM1EQ8WY54 764 aa15.03■□□□□ -0
VRK3-201ENST00000316763 SLCO2A1Q92959 643 aa15.03■□□□□ -0
VRK3-201ENST00000316763 ART4Q93070 314 aa15.03■□□□□ -0
VRK3-201ENST00000316763 VCPIP1Q96JH7 1222 aa15.03■□□□□ -0
VRK3-201ENST00000316763 MRPL47Q9HD33 250 aaKnown RBP15.03■□□□□ -0
VRK3-201ENST00000316763 GTF2IRD1Q9UHL9 959 aa15.03■□□□□ -0
VRK3-201ENST00000316763 DNAH12Q6ZR08 3092 aa15.02■□□□□ -0
VRK3-201ENST00000316763 ATXN2Q99700 1313 aaKnown RBP15.02■□□□□ -0
VRK3-201ENST00000316763 A0A087WUV0 522 aaPredicted RBP15.02■□□□□ -0
VRK3-201ENST00000316763 TCRBV7S2A1N4TA0A589 114 aa15.02■□□□□ -0
VRK3-201ENST00000316763 E7EVH7 732 aa15.02■□□□□ -0
VRK3-201ENST00000316763 KIAA0754O94854 1291 aa15.02■□□□□ -0
VRK3-201ENST00000316763 VNN1O95497 513 aa15.02■□□□□ -0
VRK3-201ENST00000316763 PCBP1Q15365 356 aaKnown RBP eCLIP15.02■□□□□ -0
VRK3-201ENST00000316763 EEF1DP3Q658K8 133 aa15.02■□□□□ -0
VRK3-201ENST00000316763 TAF2Q6P1X5 1199 aa15.02■□□□□ -0
VRK3-201ENST00000316763 ZBTB33Q86T24 672 aa15.02■□□□□ -0
VRK3-201ENST00000316763 SESTD1Q86VW0 696 aa15.02■□□□□ -0
VRK3-201ENST00000316763 CPNE8Q86YQ8 564 aa15.02■□□□□ -0
VRK3-201ENST00000316763 NME8Q8N427 588 aa15.02■□□□□ -0
VRK3-201ENST00000316763 ANKLE1Q8NAG6 615 aa15.02■□□□□ -0
VRK3-201ENST00000316763 DIS3LQ8TF46 1054 aaKnown RBP15.02■□□□□ -0
VRK3-201ENST00000316763 ZNF473Q8WTR7 871 aaKnown RBP15.02■□□□□ -0
VRK3-201ENST00000316763 DNAJB3Q8WWF6 145 aa15.02■□□□□ -0
VRK3-201ENST00000316763 TLCD1Q96CP7 247 aa15.02■□□□□ -0
VRK3-201ENST00000316763 SCLT1Q96NL6 688 aa15.02■□□□□ -0
VRK3-201ENST00000316763 CCT8L2Q96SF2 557 aa15.02■□□□□ -0
VRK3-201ENST00000316763 IMPG2Q9BZV3 1241 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms