RNA–Protein interactions for RNA: ENST00000316436.3

LSMEM2-201, Transcript of leucine rich single-pass membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM2, Length 1,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2-201ENST00000316436 PAEPP09466 180 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 FAM163BP0C2L3 166 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 GNA15P30679 374 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 PBX2P40425 430 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 PSMC1P62191 440 aaKnown RBP16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 FMO1Q01740 532 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 FAM171A1Q5VUB5 890 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 TAF3Q5VWG9 929 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 CYP26C1Q6V0L0 522 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 ACOT1Q86TX2 421 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 TTC39CQ8N584 583 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 SPATA18Q8TC71 538 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 TMEM176AQ96HP8 235 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 PKMYT1Q99640 499 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 NT5C1AQ9BXI3 368 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 SNX25Q9H3E2 840 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 NHEJ1Q9H9Q4 299 aaPredicted RBP16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 CRTAC1Q9NQ79 661 aa16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 ZNHIT6Q9NWK9 470 aaKnown RBP16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 DDX43Q9NXZ2 648 aaKnown RBP16.91■□□□□ 0.3
LSMEM2-201ENST00000316436 COL4A4P53420 1690 aaPredicted RBP16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 A8MXQ7 604 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 ZNF263O14978 683 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 SYN3O14994 580 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 CA3P07451 260 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 MMEP08473 750 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 PDGFRBP09619 1106 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 SSTR3P32745 418 aaPredicted RBP16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 BMP8BP34820 402 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 GNL1P36915 607 aaPredicted RBP16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 PDE6CP51160 858 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 MRPL58Q14197 206 aaKnown RBP16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 VARS2Q5ST30 1063 aaKnown RBP16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 OVOS1Q6IE37 1185 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 C12orf29Q8N999 325 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 CCDC112Q8NEF3 446 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 TMEM209Q96SK2 561 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 PCDHB18PQ96TA0 734 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 C17orf80Q9BSJ5 609 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 SPG21Q9NZD8 308 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 DSEQ9UL01 958 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 CDH23Q9H251 3354 aa16.9■□□□□ 0.3
LSMEM2-201ENST00000316436 PATJQ8NI35 1801 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 SSU72P8A0A1W2PR75 194 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 DDX3XO00571 662 aaKnown RBP eCLIP16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 TRAPPC3O43617 180 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 OAZ2O95190 189 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 CDR2Q01850 454 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 ELAVL2Q12926 359 aaKnown RBP16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 TOGARAM2Q6ZUX3 1019 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 TMTC1Q8IUR5 882 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 FMNL3Q8IVF7 1028 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 GLYCTKQ8IVS8 523 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 CRYBG2Q8N1P7 616 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 SLC30A5Q8TAD4 765 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 AGPAT1Q99943 283 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 HERC2P3Q9BVR0 1158 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 FAM49BQ9NUQ9 324 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 SPTLC3Q9NUV7 552 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 PYCARDQ9ULZ3 195 aa16.89■□□□□ 0.29
LSMEM2-201ENST00000316436 A0A087X0T9 212 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 O00370 1275 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 THAP12O43422 761 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 TBC1D4O60343 1298 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 FGF18O76093 207 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 FAM228BP0C875 321 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 CD19P15391 556 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 PPM1AP35813 382 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 LHX1P48742 406 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 KIF11P52732 1056 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 YWHAHQ04917 246 aaPredicted RBP16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 TSR1Q2NL82 804 aaKnown RBP16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 RSPO2Q6UXX9 243 aaPredicted RBP16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 KLHL23Q8NBE8 558 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 B3GALNT2Q8NCR0 500 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 ZNF606Q8WXB4 792 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 TMEM169Q96HH4 297 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 SYT15Q9BQS2 421 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 PBX4Q9BYU1 374 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 CHST7Q9NS84 486 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 REXO2Q9Y3B8 237 aaKnown RBP16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 PCDHA11Q9Y5I1 949 aa16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 BZW2Q9Y6E2 419 aaKnown RBP16.88■□□□□ 0.29
LSMEM2-201ENST00000316436 FAM170AA1A519 330 aa16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 ARHGAP6O43182 974 aa16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 SOD2P04179 222 aa16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 CCDC172P0C7W6 258 aa16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 CCDC130P13994 396 aa16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 CTNNB1P35222 781 aa16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 CDR1P51861 262 aa16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 BPIFB4P59827 614 aa16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 INTS6LQ5JSJ4 861 aaKnown RBP16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 PPP1R26Q5T8A7 1209 aaPredicted RBP16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 PRSS55Q6UWB4 352 aaPredicted RBP16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 DDX53Q86TM3 631 aaKnown RBP16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 LRRTM3Q86VH5 581 aa16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 METTL23Q86XA0 190 aa16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 CEP57Q86XR8 500 aa16.87■□□□□ 0.29
LSMEM2-201ENST00000316436 DESI2Q9BSY9 194 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms