RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 GUCY2FP51841 1108 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 HNRNPDQ14103 355 aaKnown RBP8.33□□□□□ -1.08
CNOT4-201ENST00000315544 FRG1Q14331 258 aaKnown RBP8.33□□□□□ -1.08
CNOT4-201ENST00000315544 BRDTQ58F21 947 aaPredicted RBP8.33□□□□□ -1.08
CNOT4-201ENST00000315544 RASSF8Q8NHQ8 419 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 GPRASP2Q96D09 838 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 MAK16Q9BXY0 300 aaKnown RBP8.33□□□□□ -1.08
CNOT4-201ENST00000315544 LHX5Q9H2C1 402 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 TJP2Q9UDY2 1190 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 CHORDC1Q9UHD1 332 aaPredicted RBP8.33□□□□□ -1.08
CNOT4-201ENST00000315544 PNMA3Q9UL41 463 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 PLXNA2O75051 1894 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 CLRN2A0PK11 232 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 TARM1B6A8C7 271 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 PODXLO00592 558 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 FLOT1O75955 427 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 LINGO3P0C6S8 592 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 C1QBPQ07021 282 aaKnown RBP8.33□□□□□ -1.08
CNOT4-201ENST00000315544 PPP2R5EQ16537 467 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 FNBP1LQ5T0N5 605 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 KBTBD2Q8IY47 623 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 TRPV1Q8NER1 839 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 RAB34Q9BZG1 259 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 IFT122Q9HBG6 1241 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 HAUS2Q9NVX0 235 aa8.33□□□□□ -1.08
CNOT4-201ENST00000315544 BMP8BP34820 402 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 ZNF211Q13398 564 aaPredicted RBP8.32□□□□□ -1.08
CNOT4-201ENST00000315544 SPA17Q15506 151 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 MARCH8Q5T0T0 291 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 LRCH2Q5VUJ6 765 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 SESTD1Q86VW0 696 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 CHSY1Q86X52 802 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 EXD1Q8NHP7 514 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 CPT1BQ92523 772 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 ELMO3Q96BJ8 720 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 FMO2Q99518 471 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 FZD8Q9H461 694 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 ACTR5Q9H9F9 607 aaPredicted RBP8.32□□□□□ -1.08
CNOT4-201ENST00000315544 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.32□□□□□ -1.08
CNOT4-201ENST00000315544 Q9Y3F1 56 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 EDF1O60869 148 aaKnown RBP8.32□□□□□ -1.08
CNOT4-201ENST00000315544 TMEM63AO94886 807 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 NLRP11P59045 1033 aaKnown RBP8.32□□□□□ -1.08
CNOT4-201ENST00000315544 MYL7Q01449 175 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 GRM2Q14416 872 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 SLC1A5Q15758 541 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 CCDC137Q6PK04 289 aaKnown RBP8.32□□□□□ -1.08
CNOT4-201ENST00000315544 HAUS6Q7Z4H7 955 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 NLRX1Q86UT6 975 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 FAM160B2Q86V87 743 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 CAND1Q86VP6 1230 aaKnown RBP8.32□□□□□ -1.08
CNOT4-201ENST00000315544 OR5B17Q8NGF7 314 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 GATA6Q92908 595 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 RNF216Q9NWF9 866 aaPredicted RBP8.32□□□□□ -1.08
CNOT4-201ENST00000315544 TTLL3Q9Y4R7 772 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 TRANK1O15050 2925 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 SLC15A5A6NIM6 579 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 UNC5CO95185 931 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 ITIH2P19823 946 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 RPL7AP62424 266 aaKnown RBP8.32□□□□□ -1.08
CNOT4-201ENST00000315544 PDK4Q16654 411 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 MAPK6Q16659 721 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 ANKRD22Q5VYY1 191 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 SLC9A4Q6AI14 798 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 PGM2L1Q6PCE3 622 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 MAGEB18Q96M61 343 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 MCOLN1Q9GZU1 580 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 RXFP1Q9HBX9 757 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 VAT1LQ9HCJ6 419 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 RAB20Q9NX57 234 aa8.32□□□□□ -1.08
CNOT4-201ENST00000315544 TCP10L2B9ZVM9 353 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 PDHXO00330 501 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 CYP26A1O43174 497 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 AP1G1O43747 822 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 TSHRP16473 764 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 SOX10P56693 466 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 SEMA3BQ13214 749 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 HIC1Q14526 733 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 CDHR3Q6ZTQ4 885 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 WRNIP1Q96S55 665 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 MOV10L1Q9BXT6 1211 aaKnown RBP8.31□□□□□ -1.08
CNOT4-201ENST00000315544 KLC2Q9H0B6 622 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 ASCC2Q9H1I8 757 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-201ENST00000315544 TMEM206Q9H813 350 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 ZNF408Q9H9D4 720 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 SIRPGQ9P1W8 387 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 SRRDQ9UH36 339 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 FZD1Q9UP38 647 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 A0A0U1RQG5 324 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-201ENST00000315544 KRIT1O00522 736 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 DPYSL4O14531 572 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 PPP1R12BO60237 982 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-201ENST00000315544 FKTNO75072 461 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 RFPL1O75677 317 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 FARP2O94887 1054 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-201ENST00000315544 ZNF157P51786 506 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-201ENST00000315544 CYP4A11Q02928 519 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 MTMR3Q13615 1198 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 PQLC3Q8N755 202 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 SPOCK2Q92563 424 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms