RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 EAPPQ56P03 285 aaPredicted RBP26.74■■□□□ 1.87
HOXB3-201ENST00000311626 DEFB132Q7Z7B7 95 aa26.74■■□□□ 1.87
HOXB3-201ENST00000311626 POLIQ9UNA4 740 aa26.74■■□□□ 1.87
HOXB3-201ENST00000311626 ASS1P00966 412 aaKnown RBP26.73■■□□□ 1.87
HOXB3-201ENST00000311626 PIGRP01833 764 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 NQO1P15559 274 aaKnown RBP26.73■■□□□ 1.87
HOXB3-201ENST00000311626 NRLP54845 237 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 GALNTL6Q49A17 601 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 ACCSLQ4AC99 568 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 THNSL1Q8IYQ7 743 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 ANKLE1Q8NAG6 615 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 RBM41Q96IZ5 413 aaKnown RBP26.73■■□□□ 1.87
HOXB3-201ENST00000311626 MAGEB18Q96M61 343 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 PITPNM3Q9BZ71 974 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 ADCY3O60266 1144 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 GDF10P55107 478 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 ENPEPQ07075 957 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 PDIA2Q13087 525 aaKnown RBP26.73■■□□□ 1.87
HOXB3-201ENST00000311626 DENND1BQ6P3S1 775 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 ECHDC2Q86YB7 292 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 HOMEZQ8IX15 550 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 CEP120Q8N960 986 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 PRKAG3Q9UGI9 489 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 PHIPQ8WWQ0 1821 aa26.73■■□□□ 1.87
HOXB3-201ENST00000311626 hCG_1818297A0A087WSY0 165 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 KRT16P08779 473 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 SYCP2LQ5T4T6 812 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 DCAF15Q66K64 600 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 TRABD2AQ86V40 505 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 EMC1Q8N766 993 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 UBR7Q8N806 425 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 JOSD2Q8TAC2 188 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 C12orf65Q9H3J6 166 aaKnown RBP26.72■■□□□ 1.87
HOXB3-201ENST00000311626 TRABDQ9H4I3 376 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 TCRBV5S1A1TA0A578 114 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 FAM47DPA6NHR8 397 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 ATG7O95352 703 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 RFC1P35251 1148 aaPredicted RBP26.72■■□□□ 1.87
HOXB3-201ENST00000311626 COPS2P61201 443 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 LY6KQ17RY6 165 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 ANKRD22Q5VYY1 191 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 ERICH1Q86X53 443 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 KLHL29Q96CT2 875 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 CFAP57Q96MR6 1250 aa26.72■■□□□ 1.87
HOXB3-201ENST00000311626 CD19P15391 556 aa26.71■■□□□ 1.87
HOXB3-201ENST00000311626 RPA3P35244 121 aaPredicted RBP26.71■■□□□ 1.87
HOXB3-201ENST00000311626 BRSK2Q8IWQ3 736 aa26.71■■□□□ 1.87
HOXB3-201ENST00000311626 TNS1Q9HBL0 1735 aaKnown RBP26.71■■□□□ 1.87
HOXB3-201ENST00000311626 CD48P09326 243 aa26.71■■□□□ 1.87
HOXB3-201ENST00000311626 CDKN2BP42772 138 aa26.71■■□□□ 1.87
HOXB3-201ENST00000311626 STAT5BP51692 787 aa26.71■■□□□ 1.87
HOXB3-201ENST00000311626 OAZ1P54368 228 aa26.71■■□□□ 1.87
HOXB3-201ENST00000311626 CDH8P55286 799 aa26.71■■□□□ 1.87
HOXB3-201ENST00000311626 BNIP1Q12981 228 aa26.71■■□□□ 1.87
HOXB3-201ENST00000311626 CYTH4Q9UIA0 394 aa26.71■■□□□ 1.87
HOXB3-201ENST00000311626 IL1R2P27930 398 aa26.7■■□□□ 1.87
HOXB3-201ENST00000311626 VCPP55072 806 aaKnown RBP26.7■■□□□ 1.87
HOXB3-201ENST00000311626 KIAA0319LQ8IZA0 1049 aa26.7■■□□□ 1.87
HOXB3-201ENST00000311626 TMEM35BQ8NCS4 154 aa26.7■■□□□ 1.87
HOXB3-201ENST00000311626 TRAPPC12Q8WVT3 735 aa26.7■■□□□ 1.87
HOXB3-201ENST00000311626 STAMBPL1Q96FJ0 436 aa26.7■■□□□ 1.87
HOXB3-201ENST00000311626 VPS33BQ9H267 617 aa26.7■■□□□ 1.87
HOXB3-201ENST00000311626 PCSK1NQ9UHG2 260 aa26.7■■□□□ 1.87
HOXB3-201ENST00000311626 FAM189A1O60320 539 aa26.7■■□□□ 1.86
HOXB3-201ENST00000311626 CALB1P05937 261 aa26.7■■□□□ 1.86
HOXB3-201ENST00000311626 RPSAP08865 295 aaKnown RBP26.7■■□□□ 1.86
HOXB3-201ENST00000311626 TRPC3Q13507 836 aa26.7■■□□□ 1.86
HOXB3-201ENST00000311626 TAF5Q15542 800 aa26.7■■□□□ 1.86
HOXB3-201ENST00000311626 SLC1A5Q15758 541 aa26.7■■□□□ 1.86
HOXB3-201ENST00000311626 MSS51Q4VC12 460 aa26.7■■□□□ 1.86
HOXB3-201ENST00000311626 RNASEH2BQ5TBB1 312 aaKnown RBP26.7■■□□□ 1.86
HOXB3-201ENST00000311626 RNF149Q8NC42 400 aa26.7■■□□□ 1.86
HOXB3-201ENST00000311626 CNKSR2Q8WXI2 1034 aa26.7■■□□□ 1.86
HOXB3-201ENST00000311626 GINM1Q9NU53 330 aa26.7■■□□□ 1.86
HOXB3-201ENST00000311626 AGTPBP1Q9UPW5 1226 aa26.7■■□□□ 1.86
HOXB3-201ENST00000311626 MSCO60682 206 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 FARP2O94887 1054 aaPredicted RBP26.69■■□□□ 1.86
HOXB3-201ENST00000311626 SSTR1P30872 391 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 TCF7P36402 384 aaPredicted RBP26.69■■□□□ 1.86
HOXB3-201ENST00000311626 IL9RQ01113 521 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 MTFR1Q15390 333 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 OASLQ15646 514 aaKnown RBP26.69■■□□□ 1.86
HOXB3-201ENST00000311626 DALRD3Q5D0E6 543 aaKnown RBP26.69■■□□□ 1.86
HOXB3-201ENST00000311626 TFDP3Q5H9I0 405 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 ARFGAP1Q8N6T3 406 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 NCAPGQ9BPX3 1015 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 NIFKQ9BYG3 293 aaKnown RBP26.69■■□□□ 1.86
HOXB3-201ENST00000311626 ZBTB7AO95365 584 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 KRT19P08727 400 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 PSMA2P25787 234 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 LMNB2Q03252 620 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 TREML2Q5T2D2 321 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 RELL1Q8IUW5 271 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 TMEM192Q8IY95 271 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 KLHL14Q9P2G3 628 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 ZNF112Q9UJU3 913 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 WDR91A4D1P6 747 aa26.69■■□□□ 1.86
HOXB3-201ENST00000311626 CSDE1O75534 798 aaKnown RBP26.69■■□□□ 1.86
HOXB3-201ENST00000311626 TARBP2Q15633 366 aaKnown RBP26.69■■□□□ 1.86
HOXB3-201ENST00000311626 PTPN20Q4JDL3 420 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms