RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 PCIF1Q9H4Z3 704 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 TMEM134Q9H6X4 195 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 NLRC4Q9NPP4 1024 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 CEP72Q9P209 647 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 A0A087X0T9 212 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 PGRMC1O00264 195 aaKnown RBP13.47□□□□□ -0.25
VANGL1-201ENST00000310260 CLIC2O15247 247 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 NOL4O94818 638 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 FAM228BP0C875 321 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 MMP13P45452 471 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 OSTNP61366 133 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 SF3A3Q12874 501 aaKnown RBP eCLIP13.47□□□□□ -0.25
VANGL1-201ENST00000310260 AMHR2Q16671 573 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 SEZ6Q53EL9 994 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 ATF7IP2Q5U623 682 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 SFMBT2Q5VUG0 894 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 SLC17A8Q8NDX2 589 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 TET1Q8NFU7 2136 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 PRCCQ92733 491 aaPredicted RBP13.47□□□□□ -0.25
VANGL1-201ENST00000310260 APOL6Q9BWW8 343 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 NFKBIZQ9BYH8 718 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 ERVK-5Q9HDB9 667 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 ALPK3Q96L96 1907 aa13.47□□□□□ -0.25
VANGL1-201ENST00000310260 SCN5AQ14524 2016 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 A6NHS1 94 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 MGEA5O60502 916 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 PPFIA2O75334 1257 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 UBOX5O94941 541 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 PECAM1P16284 738 aaPredicted RBP13.46□□□□□ -0.25
VANGL1-201ENST00000310260 CCND1P24385 295 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 HOXA11P31270 313 aaPredicted RBP13.46□□□□□ -0.25
VANGL1-201ENST00000310260 EIF3BP55884 814 aaKnown RBP13.46□□□□□ -0.25
VANGL1-201ENST00000310260 RBBP5Q15291 538 aaKnown RBP13.46□□□□□ -0.25
VANGL1-201ENST00000310260 EEF1DP3Q658K8 133 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 HOOK3Q86VS8 718 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 ERICH1Q86X53 443 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 PBKQ96KB5 322 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 ACO2Q99798 780 aaKnown RBP13.46□□□□□ -0.25
VANGL1-201ENST00000310260 YIPF3Q9GZM5 350 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 EPB41L4BQ9H329 900 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 GOLPH3Q9H4A6 298 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 CCDC134Q9H6E4 229 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 SAMD15Q9P1V8 674 aa13.46□□□□□ -0.25
VANGL1-201ENST00000310260 ZBBXA8MT70 800 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 A8MUI8 341 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 BTNL10A8MVZ5 291 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 CEP104O60308 925 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 NPTXRO95502 500 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 OAS1P00973 400 aaKnown RBP13.46□□□□□ -0.26
VANGL1-201ENST00000310260 FESP07332 822 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 RAB27AP51159 221 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 KNOP1Q1ED39 458 aaKnown RBP13.46□□□□□ -0.26
VANGL1-201ENST00000310260 PLEKHG4Q58EX7 1191 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 SPDYCQ5MJ68 293 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 ANKRD20A2Q5SQ80 823 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 ANKRD20A1Q5TYW2 823 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 ANKRD20A3Q5VUR7 823 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 EPM2AIP1Q7L775 607 aaPredicted RBP13.46□□□□□ -0.26
VANGL1-201ENST00000310260 IFNLR1Q8IU57 520 aaPredicted RBP13.46□□□□□ -0.26
VANGL1-201ENST00000310260 RPUSD2Q8IZ73 545 aaKnown RBP13.46□□□□□ -0.26
VANGL1-201ENST00000310260 LRRC57Q8N9N7 239 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 POMGNT1Q8WZA1 660 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 SELENOSQ9BQE4 189 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.46□□□□□ -0.265e-6■■■□□ 16.3
VANGL1-201ENST00000310260 EIF2AQ9BY44 585 aaKnown RBP13.46□□□□□ -0.26
VANGL1-201ENST00000310260 NUCKS1Q9H1E3 243 aaKnown RBP13.46□□□□□ -0.26
VANGL1-201ENST00000310260 SLITRK6Q9H5Y7 841 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 AMACRQ9UHK6 382 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 EXOC7Q9UPT5 735 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 HES2Q9Y543 173 aa13.46□□□□□ -0.26
VANGL1-201ENST00000310260 CCDC188H7C350 402 aa13.45□□□□□ -0.26
VANGL1-201ENST00000310260 TTI1O43156 1089 aa13.45□□□□□ -0.26
VANGL1-201ENST00000310260 UPP2O95045 317 aa13.45□□□□□ -0.26
VANGL1-201ENST00000310260 SHBGP04278 402 aa13.45□□□□□ -0.26
VANGL1-201ENST00000310260 ITGA4P13612 1032 aa13.45□□□□□ -0.26
VANGL1-201ENST00000310260 MAGEA10P43363 369 aaPredicted RBP13.45□□□□□ -0.26
VANGL1-201ENST00000310260 CYP2J2P51589 502 aa13.45□□□□□ -0.26
VANGL1-201ENST00000310260 CCNG1P51959 295 aa13.45□□□□□ -0.26
VANGL1-201ENST00000310260 IFI16Q16666 785 aaKnown RBP13.45□□□□□ -0.26
VANGL1-201ENST00000310260 ZNF568Q3ZCX4 644 aa13.45□□□□□ -0.26
VANGL1-201ENST00000310260 FAM117BQ6P1L5 589 aa13.45□□□□□ -0.26
VANGL1-201ENST00000310260 NOTUMQ6P988 496 aa13.45□□□□□ -0.26
VANGL1-201ENST00000310260 ZNF365Q70YC5 407 aa13.45□□□□□ -0.26
VANGL1-201ENST00000310260 MAP4K3Q8IVH8 894 aa13.45□□□□□ -0.26
VANGL1-201ENST00000310260 THNSL1Q8IYQ7 743 aa13.45□□□□□ -0.26
VANGL1-201ENST00000310260 ELAC2Q9BQ52 826 aaKnown RBP13.45□□□□□ -0.26
VANGL1-201ENST00000310260 STRA6Q9BX79 667 aa13.45□□□□□ -0.26
VANGL1-201ENST00000310260 GOLGA8IPA6NC78 632 aa13.44□□□□□ -0.26
VANGL1-201ENST00000310260 GOLGA8JA6NMD2 632 aa13.44□□□□□ -0.26
VANGL1-201ENST00000310260 EIF3DO15371 548 aaKnown RBP eCLIP13.44□□□□□ -0.26
VANGL1-201ENST00000310260 CLDN3O15551 220 aa13.44□□□□□ -0.26
VANGL1-201ENST00000310260 AHCYL1O43865 530 aa13.44□□□□□ -0.26
VANGL1-201ENST00000310260 LUC7L3O95232 432 aaKnown RBP13.44□□□□□ -0.26
VANGL1-201ENST00000310260 NUDT17P0C025 328 aa13.44□□□□□ -0.26
VANGL1-201ENST00000310260 PPIGQ13427 754 aaKnown RBP eCLIP13.44□□□□□ -0.26
VANGL1-201ENST00000310260 ALCAMQ13740 583 aa13.44□□□□□ -0.26
VANGL1-201ENST00000310260 IKBKEQ14164 716 aa13.44□□□□□ -0.26
VANGL1-201ENST00000310260 THEMIS2Q5TEJ8 643 aa13.44□□□□□ -0.26
VANGL1-201ENST00000310260 FOXR2Q6PJQ5 311 aa13.44□□□□□ -0.26
VANGL1-201ENST00000310260 C16orf59Q7L2K0 433 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms